Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0109
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 145 7e-34
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 142 9e-33
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 140 2e-32
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 140 4e-32
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 139 6e-32
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 138 8e-32
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 138 1e-31
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 137 2e-31
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 132 7e-30
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 132 9e-30
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 130 2e-29
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 130 4e-29
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 129 7e-29
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 128 1e-28
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 127 2e-28
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 126 6e-28
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 124 2e-27
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 116 7e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 114 2e-24
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 114 2e-24
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 109 4e-23
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 108 1e-22
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 107 2e-22
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 106 4e-22
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 106 5e-22
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 99 5e-20
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 99 8e-20
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 99 1e-19
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 98 1e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 97 4e-19
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 96 7e-19
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 95 1e-18
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 95 2e-18
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 95 2e-18
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 94 2e-18
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 90 5e-17
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 90 5e-17
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 87 3e-16
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 87 5e-16
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 86 8e-16
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 85 1e-15
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 85 1e-15
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 84 2e-15
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 82 1e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 82 1e-14
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 82 1e-14
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 82 1e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 81 2e-14
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 81 2e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 81 2e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 81 3e-14
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 79 9e-14
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 79 9e-14
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 79 1e-13
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 79 1e-13
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 78 2e-13
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 78 2e-13
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 78 2e-13
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 77 3e-13
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 77 4e-13
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 77 5e-13
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 76 9e-13
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 74 3e-12
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 74 3e-12
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 73 5e-12
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 73 6e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 72 1e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 71 2e-11
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 71 2e-11
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 71 2e-11
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 71 3e-11
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 70 4e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 70 6e-11
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 69 1e-10
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 68 2e-10
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 68 2e-10
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 68 2e-10
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 68 2e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 66 5e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 66 5e-10
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 2e-09
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 64 4e-09
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 63 5e-09
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 61 3e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 57 3e-07
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 56 1e-06
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 52 1e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 52 1e-05
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 50 5e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 46 6e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 44 0.002
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 42 0.010
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 38 0.21
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 36 0.85
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 1.1
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 34 2.6
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.4
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 33 6.0
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 6.0
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 145 bits (352), Expect = 7e-34
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV +V +TAF LLLSLPVLAGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFGIISHI+
Sbjct: 243 HPEVYILILPGFGIISHIV 261
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL
Sbjct: 96 AFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHL 155
Query: 194 AGISS 208
+G+SS
Sbjct: 156 SGVSS 160
Score = 36.3 bits (80), Expect = 0.64
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH+FT G+D+DTRAYFT
Sbjct: 292 HHMFTVGLDVDTRAYFT 308
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 142 bits (343), Expect = 9e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV A+ +TA LLLSLPVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFG
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFG 239
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+PGFG++SHI+
Sbjct: 240 HPEVYILIIPGFGMVSHIV 258
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 194 AGISS 208
+GISS
Sbjct: 153 SGISS 157
Score = 33.1 bits (72), Expect = 6.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++ G+D+DTRAYFT
Sbjct: 289 HHMYAVGLDVDTRAYFT 305
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 140 bits (340), Expect = 2e-32
Identities = 66/79 (83%), Positives = 71/79 (89%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
Q PLFV AV +TA LLLSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFGIISH++
Sbjct: 240 HPEVYILILPGFGIISHVV 258
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 89 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 501 SYYSQERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
+YY+ GKKE FG HH+FT G+D+DTRAYFT
Sbjct: 259 AYYA---GKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 306
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 140 bits (338), Expect = 4e-32
Identities = 66/80 (82%), Positives = 73/80 (91%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
D++ LF +V ITA LLLSLPVLAGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FF
Sbjct: 163 DKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFF 222
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVYILILPGFGIISH+I
Sbjct: 223 GHPEVYILILPGFGIISHMI 242
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/65 (46%), Positives = 35/65 (53%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
+F R+ + F + G GTG TVYPPLS + H G SVDL IFSLHL
Sbjct: 77 SFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHL 136
Query: 194 AGISS 208
AG SS
Sbjct: 137 AGASS 141
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +3
Query: 516 ERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
E GKKETFG HH+FT G+D+DTRAYFT
Sbjct: 245 ESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFT 290
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 139 bits (336), Expect = 6e-32
Identities = 66/79 (83%), Positives = 71/79 (89%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
Q PLFV +V ITA LLLSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFG+ISHI+
Sbjct: 240 HPEVYILILPGFGMISHIV 258
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/65 (52%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHL
Sbjct: 93 AFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHL 152
Query: 194 AGISS 208
AG+SS
Sbjct: 153 AGVSS 157
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/59 (40%), Positives = 29/59 (49%)
Frame = +3
Query: 477 FTRIWYNFSYYSQERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
F I + +YYS GKKE FG HH+FT G+D+DTRAYFT
Sbjct: 251 FGMISHIVTYYS---GKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFT 306
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 138 bits (335), Expect = 8e-32
Identities = 65/79 (82%), Positives = 71/79 (89%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
Q PLFV +V ITA LLLSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFG+ISH++
Sbjct: 241 HPEVYILILPGFGMISHVV 259
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/65 (58%), Positives = 42/65 (64%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHL
Sbjct: 94 AFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHL 153
Query: 194 AGISS 208
AGISS
Sbjct: 154 AGISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 138 bits (334), Expect = 1e-31
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
Q PLFV +V +TA LLLSLPVLA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFG+ISH++
Sbjct: 240 HPEVYILILPGFGMISHVV 258
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 89 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 41.5 bits (93), Expect = 0.017
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +3
Query: 477 FTRIWYNFSYYSQERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
F I + +YY+ GKKE FG HH+FT G+D+DTRAYFT
Sbjct: 251 FGMISHVVTYYA---GKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 306
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 137 bits (332), Expect = 2e-31
Identities = 62/79 (78%), Positives = 73/79 (92%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV ++ +TAF LLL++PVLAGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFG
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFG 247
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFG+ISHI+
Sbjct: 248 HPEVYILILPGFGMISHIV 266
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F +VE G GTG TVYPPLSS +H G +VDLAIFSLH+
Sbjct: 101 AFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHI 160
Query: 194 AGISS 208
+G SS
Sbjct: 161 SGASS 165
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+D+DTRAYFT
Sbjct: 297 HHMYTVGLDVDTRAYFT 313
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 132 bits (319), Expect = 7e-30
Identities = 59/79 (74%), Positives = 71/79 (89%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLF +V +TA+ LLLSLPVLAGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFG
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFG 345
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ILP FG+ISHI+
Sbjct: 346 HPEVYIVILPAFGVISHIV 364
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + + +++ GAG G T YPP+S+ R+VD AIF++H+
Sbjct: 199 AFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHV 258
Query: 194 AGISS 208
+G SS
Sbjct: 259 SGASS 263
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 132 bits (318), Expect = 9e-30
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
DQ+PLF+ AVGITA LLLSLPVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FF
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 211
Query: 451 GHPEVYILI 477
GHPEVYILI
Sbjct: 212 GHPEVYILI 220
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 66 AFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 125
Query: 194 AGISS 208
AGISS
Sbjct: 126 AGISS 130
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 130 bits (315), Expect = 2e-29
Identities = 59/79 (74%), Positives = 70/79 (88%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV ++ ITAF LLLSLPVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+PGFGIISH++
Sbjct: 241 HPEVYILIIPGFGIISHVV 259
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/65 (56%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI I F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 94 AFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Query: 194 AGISS 208
ISS
Sbjct: 154 TSISS 158
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 130 bits (313), Expect = 4e-29
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV A+ ITAF LLLSLPVL+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFG
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFG 240
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+PGFGI+SHI+
Sbjct: 241 HPEVYILIIPGFGIVSHIV 259
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/65 (56%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
+F RI I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 94 SFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHL 153
Query: 194 AGISS 208
ISS
Sbjct: 154 TSISS 158
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 129 bits (311), Expect = 7e-29
Identities = 56/78 (71%), Positives = 69/78 (88%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
LPLFV +V +T+F +++++PVLA AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 457 PEVYILILPGFGIISHII 510
PEVYILILPGFG++SHII
Sbjct: 245 PEVYILILPGFGLVSHII 262
Score = 56.0 bits (129), Expect = 7e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +2
Query: 92 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 128 bits (309), Expect = 1e-28
Identities = 69/114 (60%), Positives = 75/114 (65%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
DQ+PLFV AVGITAF LLLSLPVLAGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FF
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 235
Query: 451 GHPEVYILILPGFGIISHIIHXXXXXXXXXXXXXXFMLY*QLGY*DLLXELIIY 612
GHP++ + FM L Y DLL ELI+Y
Sbjct: 236 GHPKLMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMY 289
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHL
Sbjct: 90 AFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHL 149
Query: 194 AGISS 208
AGISS
Sbjct: 150 AGISS 154
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 127 bits (307), Expect = 2e-28
Identities = 59/79 (74%), Positives = 69/79 (87%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV +V +TAF LLL+LPVLA AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ILPGFGIIS I+
Sbjct: 283 HPEVYIMILPGFGIISQIV 301
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 95 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 126 bits (303), Expect = 6e-28
Identities = 62/79 (78%), Positives = 67/79 (84%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+L LF AV ITA LLLSLPVLAG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFG
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFG 240
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+PGFGIIS I
Sbjct: 241 HPEVYILIIPGFGIISTTI 259
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +2
Query: 89 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+D+DTRAYFT
Sbjct: 290 HHMYTVGLDVDTRAYFT 306
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 124 bits (299), Expect = 2e-27
Identities = 62/79 (78%), Positives = 68/79 (86%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+L LF AV ITA LLLSLPVLA AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFG
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFG 266
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+PGFGIIS +I
Sbjct: 267 HPEVYILIIPGFGIISTVI 285
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/65 (44%), Positives = 36/65 (55%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + + I+ENG GTG T+YPPLS +H VDL IF LHL
Sbjct: 120 AFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHL 179
Query: 194 AGISS 208
+GISS
Sbjct: 180 SGISS 184
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+D+DTRAYFT
Sbjct: 316 HHMYTVGLDVDTRAYFT 332
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 116 bits (278), Expect = 7e-25
Identities = 53/75 (70%), Positives = 62/75 (82%)
Frame = +1
Query: 283 LFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 462
+ V A T+ LLLSLPVLA IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPE
Sbjct: 273 IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPE 332
Query: 463 VYILILPGFGIISHI 507
VY+LILPGFGI+SHI
Sbjct: 333 VYVLILPGFGIVSHI 347
Score = 39.1 bits (87), Expect = 0.091
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 98 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 114 bits (274), Expect = 2e-24
Identities = 51/79 (64%), Positives = 66/79 (83%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+P FG++S I+
Sbjct: 258 HPEVYILIVPVFGVVSQIV 276
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI + F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 194 AGISS 208
+G+SS
Sbjct: 171 SGLSS 175
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 114 bits (274), Expect = 2e-24
Identities = 51/79 (64%), Positives = 66/79 (83%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILI+P FG++S I+
Sbjct: 258 HPEVYILIVPVFGVVSQIV 276
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI + F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 194 AGISS 208
+G+SS
Sbjct: 171 SGLSS 175
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 109 bits (263), Expect = 4e-23
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
DQ+ +FV +T+F L+LS+PVLAG++ LL DRN NTSF+D GG+P+LYQHLF FF
Sbjct: 189 DQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFF 248
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVY++ILP FGIIS +
Sbjct: 249 GHPEVYVIILPVFGIISEAV 268
Score = 33.5 bits (73), Expect = 4.5
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+DIDTR YF+
Sbjct: 300 HHMYTAGLDIDTRTYFS 316
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 108 bits (260), Expect = 1e-22
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +1
Query: 283 LFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 462
LF+ A ITA L+++LPVLAG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 463 VYILILPGFGIISHII 510
VYI++LP FG+IS I+
Sbjct: 246 VYIILLPVFGLISTIV 261
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 17 FXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 196
F R+ + F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 197 GISS 208
GISS
Sbjct: 157 GISS 160
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 107 bits (257), Expect = 2e-22
Identities = 51/61 (83%), Positives = 55/61 (90%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV AV ITA LLLSLPVLAGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F G
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Query: 454 H 456
H
Sbjct: 159 H 159
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 89 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 106 bits (255), Expect = 4e-22
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = +1
Query: 304 ITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 483
IT+ LLL+LPVL G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP
Sbjct: 196 ITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILP 255
Query: 484 GFGIISHII 510
FG+ISH+I
Sbjct: 256 AFGVISHVI 264
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 92 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 208
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 33.9 bits (74), Expect = 3.4
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+++DTRAYFT
Sbjct: 295 HHMYTTGLEVDTRAYFT 311
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 106 bits (254), Expect = 5e-22
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = +1
Query: 280 PLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 459
P+ + + T+ L+ S+PVLA +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHP
Sbjct: 185 PMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHP 244
Query: 460 EVYILILPGFGIISHII 510
EVYILILP FG+ISHI+
Sbjct: 245 EVYILILPAFGVISHIL 261
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 98 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 35.9 bits (79), Expect = 0.85
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH+F G+DIDTRAYFT
Sbjct: 293 HHMFVAGLDIDTRAYFT 309
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 99 bits (238), Expect = 5e-20
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV +V ITA LLLSLPVLAGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 RIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/65 (55%), Positives = 41/65 (63%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHL
Sbjct: 94 AFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHL 153
Query: 194 AGISS 208
AG+SS
Sbjct: 154 AGLSS 158
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 99.1 bits (236), Expect = 8e-20
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 441
+LPLFV A+ +TA LLLSLPVLAGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 194 AGISS 208
+GISS
Sbjct: 153 SGISS 157
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/78 (57%), Positives = 59/78 (75%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
L LF ++ + + L+LSLPVLA IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 457 PEVYILILPGFGIISHII 510
PEVY++ILP FG+ S I
Sbjct: 225 PEVYVVILPVFGLFSSSI 242
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 101 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+DIDTR+YFT
Sbjct: 273 HHMYTAGLDIDTRSYFT 289
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 98.3 bits (234), Expect = 1e-19
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = +1
Query: 295 AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 474
++ +T+F LLLSLPV+ ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 475 ILPGFGIISHII 510
ILPGFGIIS ++
Sbjct: 253 ILPGFGIISLLL 264
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 89 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 96.7 bits (230), Expect = 4e-19
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +1
Query: 352 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 510
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS I
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTI 284
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIF 181
AF R+ I F I+E G GTG T+ YPPLS +H G SVDLAIF
Sbjct: 122 AFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIF 181
Query: 182 SLHLAGISS 208
+LHL+G+SS
Sbjct: 182 ALHLSGVSS 190
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH++T G+D+DTRAYFT
Sbjct: 349 HHMYTVGLDVDTRAYFT 365
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 95.9 bits (228), Expect = 7e-19
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
+PLF A+ T+ +LLS PVLA A+ +L D TSFF+P GGGDP++YQHLF F+ H
Sbjct: 192 MPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSH 251
Query: 457 PEVYILILPGFGIISHII 510
P VYI+ILP FG+IS +I
Sbjct: 252 PAVYIMILPFFGVISEVI 269
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 95.5 bits (227), Expect = 1e-18
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +1
Query: 283 LFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 441
LFV +V ITA LLLSLPVLAGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/65 (56%), Positives = 41/65 (63%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ + F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHL
Sbjct: 76 AFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHL 135
Query: 194 AGISS 208
AG+SS
Sbjct: 136 AGVSS 140
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 94.7 bits (225), Expect = 2e-18
Identities = 41/80 (51%), Positives = 61/80 (76%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
D++PLFV ++ +T+F ++L++P + A T L+ DR + T FF+PA GGD +L+QHLF FF
Sbjct: 195 DRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFF 254
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVYI+ LP G++S I+
Sbjct: 255 GHPEVYIIFLPAVGMVSSIV 274
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV ++ ITAF LLLSLPVL+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 454 HPEVYILIL 480
I++L
Sbjct: 241 QTVATIIML 249
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/65 (56%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI I F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 94 AFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHL 153
Query: 194 AGISS 208
ISS
Sbjct: 154 TSISS 158
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV + + A ++L+LP L A+ +LL DR L ++FFDP GG +L+QH F FG
Sbjct: 199 RVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFG 258
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILPGFG+IS +I
Sbjct: 259 HPEVYILILPGFGMISEVI 277
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 89.8 bits (213), Expect = 5e-17
Identities = 44/80 (55%), Positives = 55/80 (68%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
+++PLFV + AF L+ + PVL A LL DR+ T FF P GGD +L+QHLF FF
Sbjct: 197 NRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFF 256
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVYILILP GIIS ++
Sbjct: 257 GHPEVYILILPTMGIISEVL 276
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV A+ ITA LLL+LPVL+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI I F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 94 AFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHM 153
Query: 194 AGISS 208
ISS
Sbjct: 154 TSISS 158
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
+ +PLF AV TA LLLSLPVLA +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 185 ENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWW 244
Query: 451 GHPEVYILIL 480
HPEV I+ L
Sbjct: 245 NHPEVKIICL 254
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL
Sbjct: 99 AFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHL 158
Query: 194 AGISS 208
+G SS
Sbjct: 159 SGFSS 163
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 86.6 bits (205), Expect = 5e-16
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 376 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 510
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Score = 39.9 bits (89), Expect = 0.052
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 477 FTRIWYNFSYYSQERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
F I + ++YS GK+E FG HH+FT G+D+DTRAYFT
Sbjct: 228 FGMISHVIAHYS---GKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFT 283
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/69 (57%), Positives = 53/69 (76%)
Frame = +1
Query: 304 ITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 483
+T+ L+ SLP+L AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP
Sbjct: 202 VTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILP 259
Query: 484 GFGIISHII 510
FG+ S I+
Sbjct: 260 VFGLTSLIL 268
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 107 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 208
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 454 H--PEVYILIL 480
P + I+I+
Sbjct: 258 QIWPIIIIIII 268
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI + F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 194 AGISS 208
+G+SS
Sbjct: 171 SGLSS 175
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 85.0 bits (201), Expect = 1e-15
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+FV L+ LP L G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 454 HPEVYILILPGFGIISHI 507
HP VY+L+LP FGI S +
Sbjct: 266 HPAVYVLVLPVFGIFSEL 283
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/80 (47%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FF 450
++PLFV A+ T+ +L+ PV+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 206 KMPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
Query: 451 GHPEVYILILPGFGIISHII 510
HP VYI++LP FG++S ++
Sbjct: 265 SHPAVYIMVLPSFGVMSEVV 284
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHL 438
+LPL + + +TA L +PVL A +LL DR+ T FF GGGDPIL+QHL
Sbjct: 213 RLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHL 272
Query: 439 F*FFGHPEVYILILPGFGIISHII 510
F FGHPEVYI+ILP +GI+ ++
Sbjct: 273 FWIFGHPEVYIMILPAWGILGDVL 296
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 101 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
+P ++ +T L PVL A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGH
Sbjct: 342 MPFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGH 401
Query: 457 PEVYILILPGFGIISHII 510
PEVY+LI+P FG I+ I+
Sbjct: 402 PEVYVLIIPTFGFINMIV 419
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +1
Query: 322 LLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 501
L+ +P LAGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S
Sbjct: 152 LVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYS 211
Query: 502 HII 510
II
Sbjct: 212 EII 214
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++PLFV TA +++++P L + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILP G++S ++
Sbjct: 238 HPEVYILILPAMGLVSELL 256
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 81.8 bits (193), Expect = 1e-14
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLF + + +L + P L + +++ DR T+FF+P GG+ ++++HLF FG
Sbjct: 189 RLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFG 248
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILP FGI S +I
Sbjct: 249 HPEVYILILPAFGIFSEVI 267
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +1
Query: 319 LLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 498
+L + P+L AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GII
Sbjct: 282 ILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGII 339
Query: 499 SHII 510
S+I+
Sbjct: 340 SYIL 343
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
+++P+FV AV + +F ++ +LP L A +L DR FF A GDPIL+QHLF FF
Sbjct: 202 NRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFF 260
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVYI+ +P G++S II
Sbjct: 261 GHPEVYIIFIPALGMVSSII 280
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +1
Query: 319 LLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 498
+L + P+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+
Sbjct: 250 ILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIV 308
Query: 499 SHII 510
S I+
Sbjct: 309 SLIL 312
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = -3
Query: 207 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLI*X 28
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 27 IRXNA 13
IR NA
Sbjct: 138 IRGNA 142
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -1
Query: 440 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNXNAVIPTAHTNKG 279
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+ AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 79.0 bits (186), Expect = 9e-14
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV ++ T+ +L+ PVL ++ ++ + FDPA GGDP+L+QH F F+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYS 258
Query: 454 HPEVYILILPGFGIISHII 510
HP VYI++LP +IS ++
Sbjct: 259 HPAVYIMVLPAMAVISEVV 277
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 79.0 bits (186), Expect = 9e-14
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF 441
+ LF +V + ++ +LP LA +LL +R+L FF DPA GDP L+QH+F
Sbjct: 186 MSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIF 245
Query: 442 *FFGHPEVYILILPGFGIISHII 510
FFGHPEVYIL+LP G++S +I
Sbjct: 246 WFFGHPEVYILVLPAMGLVSEVI 268
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 10/89 (11%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDP----AG------GGDPI 423
+LPL + A ITA LLS PVL A +L+ DR+L TSFF AG GG P+
Sbjct: 232 RLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPV 291
Query: 424 LYQHLF*FFGHPEVYILILPGFGIISHII 510
L+QHLF F GHPEVYI+++P GI S +I
Sbjct: 292 LFQHLFWFLGHPEVYIVLIPALGITSEVI 320
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+F + + + LL P+L A +L DR L +DPA GG +L+QHLF FFG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
Query: 454 HPEVYILILPGFGIISHII 510
HPEVY+L LP FGI+S II
Sbjct: 265 HPEVYVLALPFFGIVSEII 283
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+FV +T+ ++ + P + A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYILILP GIIS +I
Sbjct: 260 HPEVYILILPAMGIISEVI 278
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPLFV +V ITA ++L+LPVLA +T+LL DRN NTSFF +GGGDP+LY+H+ F+
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYK 255
Query: 454 HPEVYILILPGFGI 495
+P V ILI GI
Sbjct: 256 NP-VLILIWLTSGI 268
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF RI + F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL
Sbjct: 111 AFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHL 170
Query: 194 AGISS 208
+G+SS
Sbjct: 171 SGLSS 175
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPA----------GGGDPI 423
+LPL V + LL+ P L +LL DR L TSFF P GGG P+
Sbjct: 210 RLPLTVWGIFTATVMALLAFPALFVGSVMLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPL 269
Query: 424 LYQHLF*FFGHPEVYILILPGFGIISHII 510
L+QHLF FFGHPEVYI+ LP FGI+S +I
Sbjct: 270 LFQHLFWFFGHPEVYIVALPAFGIVSDLI 298
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/52 (67%), Positives = 37/52 (71%)
Frame = +3
Query: 375 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYSQERGKK 530
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYY + KK
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKK 58
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +2
Query: 497 FLILFTRKRKKRNFWLFRNNLCYTSNWVIRIYXLSSSYIHWRYRY*YTSIF 649
F F K KK N W+F +NLCY SNW+I IY LSSSYI+ Y Y++ F
Sbjct: 48 FSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSYWYSTYF 98
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 77.0 bits (181), Expect = 4e-13
Identities = 35/79 (44%), Positives = 53/79 (67%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
Q+PL + ++ +L++LP A A+ +LLTDR + FF+PA GGDPI Y HLF F
Sbjct: 182 QVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTF 241
Query: 454 HPEVYILILPGFGIISHII 510
HPEVY+L++P G++ ++
Sbjct: 242 HPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+F A+ I A ++++ P + A +L +R+ FF GGDP+L+QHLF FFG
Sbjct: 206 RMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFG 265
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ LP G++S I+
Sbjct: 266 HPEVYIIFLPAAGLVSMIV 284
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 75.8 bits (178), Expect = 9e-13
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDP-----------AGGGDP 420
+LPL + A+ ITA +LPVL A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 421 ILYQHLF*FFGHPEVYILILPGFGIISHII 510
+L+QHLF F+ HP VYI+ILP G++S I+
Sbjct: 278 LLWQHLFWFYSHPAVYIMILPAMGMVSDIL 307
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 73.7 bits (173), Expect = 3e-12
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAG-----------GGDP 420
++P+ A IT+ LL+ VL A +L DR TSFF P+G GG
Sbjct: 217 RMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSA 276
Query: 421 ILYQHLF*FFGHPEVYILILPGFGIISHII 510
+L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 277 LLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
D+LP+ V + L+++P ++ A +L DRN T FFD A GG P+L+QHLF F
Sbjct: 215 DRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMF 274
Query: 451 GHPEVYILILPGFGIIS 501
HP VY+++LP GI+S
Sbjct: 275 AHPWVYVVVLPAMGIVS 291
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FF 450
++P+F ++ T +L + P L +LL DRNL T FF +PAGG +L+ HLF FF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVYIL+ P G ++ +I
Sbjct: 247 GHPEVYILLFPALGAMADVI 266
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+F A+ + A ++ + P + A +L +R + FF GGDP+L+QHLF FFG
Sbjct: 265 RMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFG 324
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ LP G++S I+
Sbjct: 325 HPEVYIIFLPAAGMVSMIV 343
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+F IT ++ + PVL A+ +L DR FF GG P+L+ +LF +G
Sbjct: 220 RMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWG 279
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ILP FGI S II
Sbjct: 280 HPEVYIVILPAFGIFSEII 298
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXL-LLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 447
++L +FV A + AF L L+ +PVL A+T+L D+ + T FFD A GGD + YQ+LF F
Sbjct: 179 NKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWF 237
Query: 448 FGHPEVYILILPGFGIISHII 510
+ HP VY++ LP ++ I+
Sbjct: 238 YSHPAVYVIFLPFMAMVFEIV 258
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
DQ+ LF ++ IT +LSLP+LAG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 451 GHPEVYILIL 480
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/78 (38%), Positives = 51/78 (65%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P++V +V + L SL L A ++L +R + S+F+PA GGDP+L+Q F F+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
Query: 454 HPEVYILILPGFGIISHI 507
HP VY+++LP GI++ +
Sbjct: 250 HPTVYVMLLPYLGILAEV 267
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+ + + TAF + ++ P L +L +R L FFD GGDP+L+QHLF FG
Sbjct: 222 KMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFG 281
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ LP G+++ ++
Sbjct: 282 HPEVYIIFLPAAGMVATML 300
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 70.1 bits (164), Expect = 4e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+F +TA +L P L +L +R + FF A GGD +L+QHLF FG
Sbjct: 196 KMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFG 255
Query: 454 HPEVYILILPGFGIISHII 510
HPEVYI+ LP G IS I+
Sbjct: 256 HPEVYIIFLPAAGAISTIL 274
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
+P+F + S P+L GA+ +L DR L+ FF GG+ ++Y +LF +GH
Sbjct: 226 MPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGH 285
Query: 457 PEVYILILPGFGIISHII 510
PEVYIL+LP FGI S ++
Sbjct: 286 PEVYILVLPAFGIFSEVV 303
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
+PL+ V + +L + P L + +R + FFDP GGDP+L+QHLF FGH
Sbjct: 223 MPLYAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGH 282
Query: 457 PEVYILILPGFGIISHII 510
PEVYI+ LP + + I+
Sbjct: 283 PEVYIIFLPLIALAAMIV 300
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 450
D++P++ +TA +L P L +L +R FF A GGD +L+QHLF F
Sbjct: 195 DRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLF 254
Query: 451 GHPEVYILILPGFGIISHII 510
GHPEVYI+ LP G IS I+
Sbjct: 255 GHPEVYIIFLPAAGAISTIL 274
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/79 (44%), Positives = 46/79 (58%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LP V T L + P+L A+ +L DR L T FF GG+ +LY +LF +G
Sbjct: 243 RLPFVVWTSLTTNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWG 302
Query: 454 HPEVYILILPGFGIISHII 510
HPEVY ++LP FG IS II
Sbjct: 303 HPEVYFVVLPAFGFISEII 321
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
+P+F ++ S P+L A+ +L DR L+ F GG+P++Y +LF +GH
Sbjct: 225 MPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGH 284
Query: 457 PEVYILILPGFGIISHI 507
PEVYILILP FG+ S +
Sbjct: 285 PEVYILILPAFGVFSEV 301
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 89 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDP 402
Q PLFV AV ITA LLLSLPVLA IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +3
Query: 273 SITLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFW 452
SIT ICM C +Y TCFS S+Y IIN K KY IF W P +STFILIFW
Sbjct: 92 SITFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFW 151
Query: 453 T 455
T
Sbjct: 152 T 152
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/57 (52%), Positives = 34/57 (59%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 184
AF R+ + F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 9 AFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = +2
Query: 14 AFXRIXYIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 193
AF R+ I F VE GAGTG TVYPPLS +H G SVDLAIFSLHL
Sbjct: 93 AFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHL 152
Query: 194 AGISS 208
+GISS
Sbjct: 153 SGISS 157
Score = 37.1 bits (82), Expect = 0.37
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAG 348
+LPLFV A+ +TA LLLSLPVLAG
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 319 LLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 498
+L+S P+L + + DR L+T F+ GG +LY +L +GHPEVYILILP FGI
Sbjct: 234 ILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIF 293
Query: 499 SHII 510
S II
Sbjct: 294 SEII 297
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
+PLF TA ++ ++P L L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 457 PEVYILILPGFGIISHI 507
PEVYILILP FG+ S I
Sbjct: 305 PEVYILILPAFGVYSEI 321
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAG-----------GGDP 420
+LP+ + + ITA +LPVL + + DR T FF P+G GG P
Sbjct: 221 RLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQP 280
Query: 421 ILYQHLF*FFGHPEVYILILPGFGIISHII 510
+L+QHLF F+ HP VYI++LP G++S ++
Sbjct: 281 LLWQHLFWFYSHPAVYIMLLPIMGMVSDML 310
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+F ++ T+ LL+L L A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 454 HPEVYILILPGFGI 495
HP VY+++LP GI
Sbjct: 258 HPAVYVMLLPYLGI 271
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 86 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFF-----------DPAGGGDPI 423
+P+F ++ +T + +L + L A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 424 LYQHLF*FFGHPEVYILILPGFGIIS 501
L+ HLF FFGHPEVYI+ P G+++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMA 277
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +1
Query: 277 LPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 456
LPLFV AV A P + G +LL ++ S++ GG +++++LF +FGH
Sbjct: 211 LPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGH 269
Query: 457 PEVYILILPGFG 492
PEVY+L+LPG G
Sbjct: 270 PEVYLLLLPGTG 281
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNT 387
D++ L ++ ITA LLLSLPVLAGAIT+LLTDRN+NT
Sbjct: 163 DKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 271 DQLPLFV*AVGITAFXLLLSLPVLAGAITILLTDR 375
D++PLF+ AV IT LLLSLPVLAGAIT+LLTDR
Sbjct: 120 DRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 128 PLSSNIAHRGRSVDLAIFSLHLAGISS 208
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +1
Query: 445 FFGHPEVYILILPGFGIISHII 510
FFGHPEVYILILPGFG+ISHI+
Sbjct: 2 FFGHPEVYILILPGFGMISHIV 23
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/59 (40%), Positives = 29/59 (49%)
Frame = +3
Query: 477 FTRIWYNFSYYSQERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
F I + +YYS GKKE FG HH+FT G+D+DTRAYFT
Sbjct: 16 FGMISHIVAYYS---GKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 71
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 98 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 208
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +1
Query: 319 LLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 447
L+LS PVLA AIT+L R N SFF P G P + F F
Sbjct: 185 LILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 291 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 443
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/48 (45%), Positives = 25/48 (52%)
Frame = +3
Query: 510 SQERGKKETFGCXXXXXXXXXXXXXXXXXXXHHIFTGGIDIDTRAYFT 653
SQE GKKE FG HH+FT G+D+DTRAYFT
Sbjct: 172 SQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFT 219
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 460 EVYILILPGFGIISHII 510
EVYILILPGFG+ISHII
Sbjct: 155 EVYILILPGFGMISHII 171
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 445 FFGHPEVYILILPGFGIISHI 507
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 432 TFILIFWTS*SLYFNFTRIWYNFSYYSQERGKK 530
+ ++IFW+S SLYFN IWYNF YY + K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 497 FLILFTRKRKKRNFWLFRNNLCYTSNWVIRIYXLS 601
F +T K K W F NNLCY S W I +S
Sbjct: 24 FPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 42.3 bits (95), Expect = 0.010
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
++P+FV + A L++ P + L+D + F+ G P+ Y F F
Sbjct: 274 RVPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLF 332
Query: 454 HPEVYILILPGFGIISHII 510
HPEVY+ ILP F I I+
Sbjct: 333 HPEVYVFILPAFAIWLEIL 351
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 1 NSARGIXTNXLYKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYF 180
+++ G N +KIL TPL Y N C K C + +NSLP Y T R +F
Sbjct: 73 STSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHF 132
Query: 181 FTT 189
T
Sbjct: 133 CPT 135
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 35.9 bits (79), Expect = 0.85
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +1
Query: 274 QLPLFV*AVGITAFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 453
+LPL V G +L ++ ++ AI IL L+ D +P+L + LF FFG
Sbjct: 167 KLPLAV--FGTFVNFILWTIMIVPVAIEILFQLLPLSLGLVDEI---NPLLARTLFWFFG 221
Query: 454 HPEVYILILPGF 489
HP VY +LP +
Sbjct: 222 HPVVYFWLLPAY 233
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +3
Query: 279 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS 458
T I M +Y+ TT S S +N N SKL++I+ S PN I ILI T
Sbjct: 86 TSILMKNPNYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTP 145
Query: 459 *SLYFNFTRI 488
L+ N T I
Sbjct: 146 SGLHSNSTSI 155
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 310 AFXLLLSLPVLAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 483
A +L++ P LA + ++ +N +F G D ++F FFGHP VY L+ P
Sbjct: 221 AIDMLVATPPLAALLLVMFIGSTVNPNFGINVGLAD-----NMFWFFGHPIVYQLLFP 273
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 409 GGDPILYQHLF*FFGHPEVYILILPGF 489
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 33.1 bits (72), Expect = 6.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 603 HHIFTGGIDIDTRAYFT 653
HH+FT G+D+DTR YF+
Sbjct: 47 HHMFTVGLDVDTRVYFS 63
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 155 GRSVDLAIFSLHLAGISS 208
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,662,479
Number of Sequences: 1657284
Number of extensions: 9148153
Number of successful extensions: 20551
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 19659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20498
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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