Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0108
(662 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 25 0.42
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 3.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.0
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 22 5.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.0
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 37 RCSRPVVPPVS-CWTPATVSPTPCPXTRDTHSP 132
R R VVPP C P+T+ P P D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSST 176
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 83 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 132
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PP ++PS + S + P+S T P +++ SP S T
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSST 176
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 88 PSPESSTIPVVRPDANSERXAWM 20
PS T PD N E AW+
Sbjct: 357 PSKRKGTYAFRTPDENGEGGAWV 379
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -2
Query: 121 YPSXMGTVWETPSPESSTIP 62
YP T W P P +S P
Sbjct: 1366 YPEWQPTEWHPPIPPTSEKP 1385
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 76 TPATVSPTPCPXTRDTHSPTPSCVXT 153
TP + + +P P + SPTP V T
Sbjct: 38 TPNSAA-SPAPPEEEAASPTPGDVPT 62
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,524
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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