Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0108
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 134 5e-32
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 134 5e-32
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 134 7e-32
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 134 7e-32
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 134 7e-32
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 134 7e-32
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 134 7e-32
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 134 7e-32
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 134 7e-32
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 134 7e-32
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 88 5e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 85 6e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 52 5e-07
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 50 2e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 37 0.015
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 35 0.059
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 34 0.10
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 34 0.10
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 31 0.96
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 0.96
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 2.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical ... 29 3.9
AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical ... 29 3.9
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 6.8
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 6.8
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 27 9.0
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 27 9.0
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 27 9.0
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 27 9.0
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 134 bits (324), Expect = 5e-32
Identities = 66/84 (78%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (254), Expect = 2e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALFQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 134 bits (324), Expect = 5e-32
Identities = 66/84 (78%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (254), Expect = 2e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALFQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (255), Expect = 1e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEA+FQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (255), Expect = 1e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEA+FQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (254), Expect = 2e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALFQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (255), Expect = 1e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEA+FQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAP TMK KI P RKYSVWI GSIL
Sbjct: 319 TALAP-TMKIKIIAPPERKYSVWIGGSIL 346
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (255), Expect = 1e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEA+FQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 146
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 147 MKILTERGYSFTTTAEREIVRDIK 170
Score = 106 bits (254), Expect = 2e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 170 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 229
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 230 GIHETSYNSIMKCDIDIRKDLYANTV 255
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 275 TALAPSTMKIKIIAPPERKYSVWIGGSIL 303
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALFQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 215 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 274
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 176
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 177 MKILTERGYSFTTTAEREIVRDIK 200
Score = 106 bits (254), Expect = 2e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 200 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 259
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 260 GIHETSYNSIMKCDIDIRKDLYANTV 285
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 305 TALAPSTMKIKIIAPPERKYSVWIGGSIL 333
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALFQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 245 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 304
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 134 bits (323), Expect = 7e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTG+VLDSGDGV+HTVP YEGYALPHAI YL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 191 MKILTERGYSFTTTAEREIVRDIK 214
Score = 106 bits (254), Expect = 2e-23
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEMAT LEKSYEL GQVIT GNERFRC P +
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HET+Y S MKCD+DIRKDLYANTV
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTV 299
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3
Query: 564 TALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
TALAPSTMK KI P RKYSVWI GSIL
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALFQPS LGME+ + + L + GGTTMYPGI RMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 130 bits (313), Expect = 1e-30
Identities = 63/84 (75%), Positives = 67/84 (79%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYV IQA LSL+ASGRTTGIVLD+GDGV+HTVP YEGYALPHAI Y+
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYM 189
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 190 MKILTERGYTFTTTAEREIVRDIK 213
Score = 99 bits (238), Expect = 1e-21
Identities = 51/86 (59%), Positives = 55/86 (63%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV D E+A LEKSYEL GQVIT GNERFRC + P +
Sbjct: 213 KEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGA 272
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLYANTV
Sbjct: 273 GIHETTYQSIMKCDVDIRKDLYANTV 298
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3
Query: 570 LAPSTMKXKIXXPTXRKYSVWIXGSIL 650
LAPSTMK KI P RKYSVWI GSIL
Sbjct: 320 LAPSTMKIKIIAPPERKYSVWIGGSIL 346
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQP+ +GME + L + GGT+M+PGI RMQKEI
Sbjct: 258 PEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEI 317
Query: 565 Q-LSP 576
Q L+P
Sbjct: 318 QHLAP 322
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 88.2 bits (209), Expect = 5e-18
Identities = 41/86 (47%), Positives = 56/86 (65%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PA+Y+ +QA LSL+A+GRTTG+VLDSGDGV+H VP +G+A+ HAI YL
Sbjct: 134 PALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYL 193
Query: 183 MKILTERGYXFTTTAEREXVRDIKRS 260
+L GY F + E E VR++K +
Sbjct: 194 RVLLRREGYEFHRSNEFEIVREMKEN 219
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 320 LEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLXGXHETTYXSXMKCDVDIRKDLYA 499
++ SY L I N FR + P + G S MKCDVD+R+ LY+
Sbjct: 235 VKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYS 294
Query: 500 NTV 508
N V
Sbjct: 295 NIV 297
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 84.6 bits (200), Expect = 6e-17
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +3
Query: 6 AMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYLM 185
++YVA+QA L+L+A G TG+V+DSGDGV+H P YEG+AL H YL+
Sbjct: 135 SIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLI 194
Query: 186 KILTERGYXFTTTAEREXVRDIK 254
K+L +RGY F +A+ E VR +K
Sbjct: 195 KLLLQRGYNFNHSADFETVRQMK 217
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/86 (30%), Positives = 35/86 (40%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ D QE L + Y L G+VI G ERF + P +
Sbjct: 217 KEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKA 276
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G E + D+D R D Y + V
Sbjct: 277 GLSELLFGCIQASDIDTRLDFYKHIV 302
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 508 MXGGTTMYPGIDXRMQKEIQ 567
+ GGTTMYPG+ R++KE++
Sbjct: 303 LSGGTTMYPGLPSRLEKELK 322
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRT--------TGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXX 158
P +Y+A+QA L+L AS + TG+V+DSGDGV+H +P +GY + I
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIA 203
Query: 159 XXXXXXYLMKILTERGYXFTTTAEREXVRDIK 254
++ +L +R + E + IK
Sbjct: 204 GRDITYFIQSLLRDREHTIPAEQSYEVAKMIK 235
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAI 140
PA Y++ LS FA GRT G+++DSG + VP ++GYA+ HA+
Sbjct: 153 PAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAV 198
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 368 NERFRCQRLSSNPRSWVWKLXGXHETTYXSXMKCDVDIRKDLYAN 502
N RF C P+ W G H+ + + ++C +D R+ LY N
Sbjct: 430 NSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRN 474
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
TSP P + P +PP + T T + PCP T++P P+ T P
Sbjct: 122 TSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTP-PAPEPTLP 169
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
T+P P S + P VPPV+ TP T + T T T + T T PV
Sbjct: 664 TAPVNPTSPTTAPTVPPVTTTTPTTTTST--TTTTTTTTTTTQTTPTTPV 711
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
T+P P S + P VPPV+ TP T + T T T + T T PV
Sbjct: 720 TAPVNPTSPTTAPTVPPVTTTTPTTTTST--TTTTTTTTTTTQTTPTTPV 767
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
T+P P S + P VPPV+ TP T + T T T + T T PV
Sbjct: 543 TAPVNPTSPTTAPTVPPVTTTTPTTTTST--TTTTTTTTTTTQTTPTTPV 590
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWT--PATVSPTPCPXTRDTHSPTPSCVXTXPV 162
P P+ P P VPP T P TVS P P PT SC P+
Sbjct: 355 PSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSCAPQKPL 409
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 31.5 bits (68), Expect = 0.55
Identities = 24/81 (29%), Positives = 30/81 (37%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXXX 180
RPP P KP + + P PP P +P P P + +P P+ PV
Sbjct: 181 RPPPQEPPKPVEQAAPPP-PPAPMPVPVEKAPEPVPAPVEQIAPPPA-----PVQDPAPA 234
Query: 181 XXXXXXXAGTXSLPPPSGKXC 243
A LP PS K C
Sbjct: 235 PVEPSDPAPPSKLPSPS-KSC 254
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 49 PVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
P++PP PA V T P TR+T P P + P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVPIFITNRP 131
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 0.96
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
PPC +P C+ P PP P P P P P C+ P+
Sbjct: 27 PPCP---EPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPM 76
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
P T+ + P + + P + T T +PT T T + TP+ T P
Sbjct: 125 PTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
T+ + P + + P + TP T + TP T T +PT T
Sbjct: 73 TTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 28 PFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PF R P TP+ +P+P T +PTP+
Sbjct: 297 PFDRTPTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPT 334
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/76 (27%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV-AXXXXX 180
PP + S P R P PP P +P P + P P + P +
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 181 XXXXXXXAGTXSLPPP 228
AGT S PPP
Sbjct: 317 AGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/76 (27%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV-AXXXXX 180
PP + S P R P PP P +P P + P P + P +
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 181 XXXXXXXAGTXSLPPP 228
AGT S PPP
Sbjct: 338 AGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/76 (27%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV-AXXXXX 180
PP + S P R P PP P +P P + P P + P +
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 181 XXXXXXXAGTXSLPPP 228
AGT S PPP
Sbjct: 323 AGGSPPPAGTGSPPPP 338
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPC--PXTRDTHSPTPSC 144
P P P S C P P C P PC P T SP C
Sbjct: 88 PLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCC 135
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
PC PS + C P P + P PTP P +P P
Sbjct: 98 PCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVP 141
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +1
Query: 16 SPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXXXXXXXX 195
+P+ P S P P + P PTP P +P P T P A
Sbjct: 101 APAAPAEPASAPAPAPEAAPAP---EPTPAPAPEAAPAPAPDAAPTAPAAGAGGYSAGAD 157
Query: 196 XXAGTXSLP 222
G S P
Sbjct: 158 APTGGGSYP 166
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 91 TPSPESSTIPVVRPDANSERXAWMATYMA 5
TP P SST+PVV P +++ +Y+A
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLA 893
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTR 117
PP SPS P R RP PA + TP P R
Sbjct: 510 PPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAPRGR 547
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 573 RELYFLLHTVVDSRVHGGTTGHTVLAYKSL 484
+E Y L H V+D RV TGH VLA+++L
Sbjct: 892 KETYLLDH-VIDGRVLYPFTGHMVLAWRTL 920
>AF016418-7|AAK18898.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.3 protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPT-PSCVXT 153
P + P+ + V P +C+T AT PTP P D S +C T
Sbjct: 57 PASDPATGYPAPGNDVERPFACYTTAT--PTPAPVVPDMRSAALKNCART 104
>AF016418-6|AAK18899.1| 248|Caenorhabditis elegans Hypothetical
protein C49G7.4 protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPT-PSCVXT 153
P + P+ + V P +C+T AT PTP P D S +C T
Sbjct: 57 PASDPATGYPAPGNDVERPFACYTTAT--PTPAPVVPDMRSAALKNCART 104
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
P P F+ P P S T T +PT T T + TP+ T P
Sbjct: 66 PFAIPPITFNAVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTP 116
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
T+ S P + PVS T T + T P T T P P + T P
Sbjct: 32 TTISAPTTTVPITTTNPVSTTTTTTTTTTEAPTTTTTVVPIPCNICTSP 80
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT 153
PC + + + + +VP S T T + TP P T T PT + T
Sbjct: 444 PCPTTTSTTTSATT-LVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTT 491
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Frame = +1
Query: 13 TSPSKPFSRCSRPVVP------PVSCWTPATVSPTP-CPXTRDTHSPTPSCVXTXP 159
T+P+ P + S P P P + TP T+ TP P T + TPS + + P
Sbjct: 388 TTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSP 443
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 485 KDLYANTVXPVVPPCTLESTTVCKRKYSSR--PID-NEDXDH-XSYXEEVLRMDRW 640
K++ P PP LEST +R S + P+D ++ H +Y E+L D W
Sbjct: 2006 KEVSTEQQPPSSPPLNLESTYALERSLSFQWEPVDCSQRHGHVVNYEYEILGQDDW 2061
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 485 KDLYANTVXPVVPPCTLESTTVCKRKYSSR--PID-NEDXDH-XSYXEEVLRMDRW 640
K++ P PP LEST +R S + P+D ++ H +Y E+L D W
Sbjct: 2006 KEVSTEQQPPSSPPLNLESTYALERSLSFQWEPVDCSQRHGHVVNYEYEILGQDDW 2061
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 485 KDLYANTVXPVVPPCTLESTTVCKRKYSSR--PID-NEDXDH-XSYXEEVLRMDRW 640
K++ P PP LEST +R S + P+D ++ H +Y E+L D W
Sbjct: 2006 KEVSTEQQPPSSPPLNLESTYALERSLSFQWEPVDCSQRHGHVVNYEYEILGQDDW 2061
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 485 KDLYANTVXPVVPPCTLESTTVCKRKYSSR--PID-NEDXDH-XSYXEEVLRMDRW 640
K++ P PP LEST +R S + P+D ++ H +Y E+L D W
Sbjct: 2006 KEVSTEQQPPSSPPLNLESTYALERSLSFQWEPVDCSQRHGHVVNYEYEILGQDDW 2061
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 58 PPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PP S TP + T P T T SP+ S
Sbjct: 226 PPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 58 PPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PP S TP + T P T T SP+ S
Sbjct: 502 PPSSSTTPVQTTTTTAPETTSTESPSSS 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,482,850
Number of Sequences: 27780
Number of extensions: 250768
Number of successful extensions: 1162
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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