Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0108
(662 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 134 4e-32
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 133 1e-31
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 132 2e-31
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 132 2e-31
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 132 2e-31
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 132 2e-31
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 132 2e-31
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 132 3e-31
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 132 3e-31
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 122 2e-28
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 112 2e-25
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 104 6e-23
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 80 1e-15
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 50 2e-06
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 45 5e-05
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 39 0.003
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 35 0.056
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 34 0.097
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 32 0.30
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 32 0.30
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 32 0.39
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 31 0.52
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.52
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 31 0.52
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 31 0.52
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 31 0.52
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 31 0.68
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 31 0.68
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.68
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 31 0.68
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 0.90
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 31 0.90
At5g38560.1 68418.m04662 protein kinase family protein contains ... 30 1.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.2
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.2
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 30 1.6
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.6
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 30 1.6
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 29 2.1
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 2.1
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 2.1
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 2.1
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 2.1
At5g05760.1 68418.m00634 syntaxin 31 (SYP31) / SED5 identical to... 29 2.8
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 29 2.8
At2g40070.1 68415.m04923 expressed protein 29 2.8
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 29 3.6
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 29 3.6
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 29 3.6
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 28 4.8
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 28 4.8
At4g30260.1 68417.m04302 integral membrane Yip1 family protein c... 28 4.8
At3g28790.1 68416.m03593 expressed protein 28 4.8
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 28 4.8
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 28 4.8
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 28 4.8
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 4.8
At1g61080.1 68414.m06877 proline-rich family protein 28 4.8
At1g10620.1 68414.m01204 protein kinase family protein contains ... 28 4.8
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 6.4
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 28 6.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 6.4
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 27 8.4
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (325), Expect = 4e-32
Identities = 66/88 (75%), Positives = 69/88 (78%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEGYALPHAI YL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIKRSXA 266
MKILTERGY FTT+AERE VRD+K A
Sbjct: 192 MKILTERGYSFTTSAEREIVRDVKEKLA 219
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/86 (56%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ LD QEM T +EKSYEL GQVIT G ERFRC + P +
Sbjct: 215 KEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAA 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS++GMEA + L + GGTTM+PGI RM KEI
Sbjct: 260 PEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 319
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 133 bits (321), Expect = 1e-31
Identities = 67/88 (76%), Positives = 68/88 (77%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEGYALPHAI L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIKRSXA 266
MKILTERGY FTTTAERE VRDIK A
Sbjct: 192 MKILTERGYMFTTTAEREIVRDIKEKLA 219
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/86 (55%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QE+ T +EK+YEL GQVIT G ERFRC + P +
Sbjct: 215 KEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAP 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS++GMEA + L + GG+TM+PGI RM KEI
Sbjct: 260 PEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 319
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 132 bits (320), Expect = 2e-31
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEG++LPHAI YL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 192 MKILTERGYMFTTTAEREIVRDIK 215
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL +V +D QEM T +EK+YEL GQVIT G ERFRC + P +
Sbjct: 215 KEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAA 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS +GMEA + L + GGTTM+ GI RM KEI
Sbjct: 260 PEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEI 319
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 132 bits (320), Expect = 2e-31
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEG++LPHAI YL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 192 MKILTERGYMFTTTAEREIVRDIK 215
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL +V +D QEM T +EK+YEL GQVIT G ERFRC + P +
Sbjct: 215 KEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAA 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS +GMEA + L + GGTTM+ GI RM KEI
Sbjct: 260 PEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEI 319
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 132 bits (320), Expect = 2e-31
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEG++LPHAI YL
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 192 MKILTERGYMFTTTAEREIVRDIK 215
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL +V +D QEM T +EK+YEL GQVIT G ERFRC + P +
Sbjct: 215 KEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAA 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS +GMEA + L + GGTTM+ GI RM KEI
Sbjct: 260 PEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEI 319
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 132 bits (319), Expect = 2e-31
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEGYALPHAI +L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRD+K
Sbjct: 192 MKILTERGYSFTTTAEREIVRDMK 215
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ LD QE+ T +EKS+EL GQVIT G ERFRC + P +
Sbjct: 215 KEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENP 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS++GME + L + GGTTM+ GI RM KEI
Sbjct: 260 PEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEI 319
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 132 bits (319), Expect = 2e-31
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEGYALPHAI +L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRD+K
Sbjct: 192 MKILTERGYSFTTTAEREIVRDMK 215
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ LD QE+ T +EKS+EL GQVIT G ERFRC + P +
Sbjct: 215 KEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENP 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS++GME + L + GGTTM+ GI RM KEI
Sbjct: 260 PEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEI 319
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 132 bits (318), Expect = 3e-31
Identities = 66/84 (78%), Positives = 67/84 (79%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEGYALPHAI L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 192 MKILTERGYSFTTTAEREIVRDIK 215
Score = 96.7 bits (230), Expect = 1e-20
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ LD QE+ T +EK+YEL GQVIT G+ERFRC + P +
Sbjct: 215 KEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENA 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE L+QPS++GME + L + GGTTM+PGI RM KEI
Sbjct: 260 PEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 319
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 132 bits (318), Expect = 3e-31
Identities = 66/84 (78%), Positives = 67/84 (79%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYVAIQA LSL+ASGRTTGIVLDSGDGVSHTVP YEGYALPHAI L
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKILTERGY FTTTAERE VRDIK
Sbjct: 192 MKILTERGYSFTTTAEREIVRDIK 215
Score = 96.7 bits (230), Expect = 1e-20
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ LD QE+ T +EK+YEL GQVIT G+ERFRC + P +
Sbjct: 215 KEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENA 274
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIV 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 552 AKGNTALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
+K TALAPS+MK K+ P RKYSVWI GSIL
Sbjct: 316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE L+QPS++GME + L + GGTTM+PGI RM KEI
Sbjct: 260 PEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 319
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 122 bits (295), Expect = 2e-28
Identities = 58/84 (69%), Positives = 65/84 (77%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
P+MY+ IQA LSL++SGRTTGIVLDSGDGVSHTVP YEGYALPHAI YL
Sbjct: 133 PSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYL 192
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
KI+ ERGY +TT+AERE VRDIK
Sbjct: 193 TKIMMERGYTYTTSAEREIVRDIK 216
Score = 88.2 bits (209), Expect = 4e-18
Identities = 43/86 (50%), Positives = 52/86 (60%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ +D QEM ++++YEL GQVIT G ERFRC + +
Sbjct: 216 KEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETS 275
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HETTY S MKCDVDIRKDLY N V
Sbjct: 276 GIHETTYNSIMKCDVDIRKDLYGNIV 301
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3
Query: 567 ALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
ALAP +MK K+ P RKYSVW+ GSIL
Sbjct: 322 ALAPPSMKIKVVAPPERKYSVWVGGSIL 349
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQ S++GME + L + GGTTM+PGI RM KEI
Sbjct: 261 PEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEI 320
Query: 565 Q-LSP 576
L+P
Sbjct: 321 NALAP 325
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 112 bits (269), Expect = 2e-25
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PAMYV++Q+ L L++SGRTTG+VLD G+ VSHTVP YEGYALPH I YL
Sbjct: 121 PAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYL 180
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
++I+TERGY +TT+AERE VRDIK
Sbjct: 181 IEIMTERGYTYTTSAEREIVRDIK 204
Score = 67.3 bits (157), Expect = 9e-12
Identities = 35/84 (41%), Positives = 44/84 (52%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL YV LD QEM ++K+Y L GQ IT ERF C + P +
Sbjct: 204 KEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESS 263
Query: 431 GXHETTYXSXMKCDVDIRKDLYAN 502
G HE T S +KC VD R+D+Y N
Sbjct: 264 GIHEATRNSILKCPVDTRRDMYGN 287
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 567 ALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
AL PS+MK K+ P + SVWI GSIL
Sbjct: 310 ALVPSSMKVKVVVPPESECSVWIGGSIL 337
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 385 PEALFQPSILGMEAX--RXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQK 558
PE LFQPS++G E+ N L V + M GGTTM GI RM K
Sbjct: 249 PEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRD--MYGNILMTGGTTMLHGIKERMTK 306
Query: 559 EI 564
E+
Sbjct: 307 EL 308
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 104 bits (249), Expect = 6e-23
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
P+MY+ +QA LSL ASGRTTG VLDSGDGVS+ VP YEG ALPHAI YL
Sbjct: 87 PSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYL 146
Query: 183 MKILTERGYXFTTTAEREXVRDIK 254
MKI+ ERGY T+AERE VRDIK
Sbjct: 147 MKIMMERGY---TSAEREVVRDIK 167
Score = 84.2 bits (199), Expect = 7e-17
Identities = 41/86 (47%), Positives = 50/86 (58%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+E+ Y+ LD QEM ++++YEL GQVIT G ERFRC + P +
Sbjct: 167 KEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETS 226
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G HE TY S MKCD DIRKDLY N V
Sbjct: 227 GIHEKTYNSIMKCDDDIRKDLYGNIV 252
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PE LFQPS++GME + L + GGTTM+ GI+ RM KEI
Sbjct: 212 PEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEI 271
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 567 ALAPSTMKXKIXXPTXRKYSVWIXGSIL 650
ALA + M+ KI P RKYSVWI GSIL
Sbjct: 273 ALAAANMRIKIVAPPERKYSVWIGGSIL 300
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +3
Query: 9 MYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYLMK 188
+++ IQA L+L+A G TG+V+DSGDGV+H VP +GY+ PH YL+
Sbjct: 133 VFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVD 192
Query: 189 ILTERGYXFTTTAEREXVRDIK 254
+L+ RGY TA+ E VR+IK
Sbjct: 193 LLSRRGYAMNKTADFETVREIK 214
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/86 (29%), Positives = 37/86 (43%)
Frame = +2
Query: 251 QEKLXYVXLDXXQEMATXXXXXXLEKSYELXXGQVITXGNERFRCQRLSSNPRSWVWKLX 430
+EKL Y+ D +E L K+Y L G+VI G ERF+ P +
Sbjct: 214 KEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGD 273
Query: 431 GXHETTYXSXMKCDVDIRKDLYANTV 508
G + + + D+D R LY + V
Sbjct: 274 GMADMVFRCIQEMDIDNRMMLYQHIV 299
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 385 PEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDXRMQKEI 564
PEALF P ++ +E E+ + L + + GG+TMYPG+ R++KEI
Sbjct: 259 PEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEI 318
Query: 565 Q 567
Q
Sbjct: 319 Q 319
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRT-----TGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXX 167
P +Y+A+ + L+L A T TG+V+D GDG +H VP EGY + I
Sbjct: 149 PGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKD 208
Query: 168 XXXYLMKILTERGYXFTTTAEREXVRDIK 254
++ +++ ERG + R +K
Sbjct: 209 VTLFIQQLMRERGENIPPEDSFDVARKVK 237
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYL 182
PA+++A L+ FA+GR T +V+D G G + P ++GY L A+ L
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCL 213
Query: 183 MKILTERG 206
+K L +G
Sbjct: 214 LKSLESKG 221
Score = 34.7 bits (76), Expect = 0.056
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Frame = +2
Query: 329 SYELXXGQVITXGNERFRCQRLSSNPR------------SWVWKLXGXHETTYXSXMKCD 472
SYEL GQ + G +RF+ + NP + + G S KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 473 VDIRKDLYAN 502
VDIR++LY++
Sbjct: 350 VDIRRELYSS 359
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 367 KRKIPLPEALFQPSILGMEAXRXXRDNXXLHXEVRRGHP*GLVRQHRMXGGTTMYPGIDX 546
+ + + EALFQPSILG+E + V + L+ + GGTT G +
Sbjct: 235 RERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFES 294
Query: 547 RMQKEIQL 570
R QKE L
Sbjct: 295 RFQKEANL 302
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXXXX 183
PP +PS P + PV PP TP+ SPTP P + +PTPS P
Sbjct: 83 PPPPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPVSPPPPT 139
Query: 184 XXXXXXAGTXSLPPP 228
+ T + PP
Sbjct: 140 PTPSVPSPTPPVSPP 154
Score = 33.1 bits (72), Expect = 0.17
Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = +1
Query: 19 PSKPFSRCSRPVVPPVSCWTPATVSP---TPCPXTRDTHSPTPSCVXTXPVAXXXXXXXX 189
P+ P PV PP TP+ SP TP P T SP P T P
Sbjct: 170 PTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSP-PDVTPTPPTPSVPSPPDV 228
Query: 190 XXXXAGTXSLPPPSG 234
S+P PSG
Sbjct: 229 TPTPPTPPSVPTPSG 243
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
PP +PS P + PV PP TP+ SPTP T SP P
Sbjct: 137 PPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
P SP+ P S P V TP P P P T SPTP V T P+
Sbjct: 124 PSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTP-TPSVPSPTPP-VPTDPM 174
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXXXX 183
PP SP P S P P V+ P P+P P T PTPS V
Sbjct: 178 PPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSP-PDVTPT-PPTPSVPSPPDVTPTPPTP 235
Query: 184 XXXXXXAGTXS-LPPPS 231
+G+ +PPPS
Sbjct: 236 PSVPTPSGSPPYVPPPS 252
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 33.9 bits (74), Expect = 0.097
Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTP------CPXTRDTHSPTPSCVXTXPVA 165
PP SP P S P PPV + P T SP P P T+ P PS V PV
Sbjct: 524 PPPPSPPPPCPESSPP--PPVVYYAPVTQSPPPPSPVYYPPVTQS--PPPPSPVYYPPVT 579
Query: 166 XXXXXXXXXXXXAGTXSLPPPS 231
T S PPPS
Sbjct: 580 NSPPPPSPVYYPPVTYSPPPPS 601
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVV--PPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXX 177
PP +P+ P P PPVS P T SP P +P P P +
Sbjct: 26 PPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPA 85
Query: 178 XXXXXXXXAGTXSLPPPS 231
+ PPP+
Sbjct: 86 TPPPVASPPPPVASPPPA 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVS------PTPCPXTR-DTHSPTPSCVXTXP 159
PP SP P + PPV+ PA ++ P P P T+ D+ SP+PS P
Sbjct: 88 PPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLP 146
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVV--PPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXX 177
PP +P+ P P PPVS P T SP P +P P P +
Sbjct: 26 PPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPA 85
Query: 178 XXXXXXXXAGTXSLPPPS 231
+ PPP+
Sbjct: 86 TPPPVASPPPPVASPPPA 103
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVS------PTPCPXTR-DTHSPTPSCVXTXP 159
PP SP P + PPV+ PA ++ P P P T+ D+ SP+PS P
Sbjct: 88 PPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLP 146
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
+PP T P + PVV P + P PTP P +PTP V T P
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPP-VITPP 208
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 1 RPPCTSPSKPFSR-CSRPVVPPVSCWTPATVS-PTPCPXTRDTHSPTPSCV 147
+PP ++P P + P PP TP V+ PTP P +PTP V
Sbjct: 145 KPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVV 195
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCV 147
PP +P P + PVV P + P PTP P +PTP V
Sbjct: 182 PPVITPPTP----TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCV 147
PP +P P + PV+ P + P PTP P +PTP V
Sbjct: 192 PPVVTPPTP----TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
PP +P P + PV+ P + P PTP P +PTP
Sbjct: 202 PPVITPPTP----TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 1 RPPCTSP--SKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
+PP P P S P PP S P T P P H P P+
Sbjct: 113 KPPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPT 161
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 4 PPCTS--PSKPFSRCSRPVV--PPVSCWTPATVSPTPCPXTRDTHSPTPSCV 147
PP T P+KP +P PP S P P P P T +PTP V
Sbjct: 124 PPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVV 175
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
P SP P S P PP S TP SP P P + SPTP
Sbjct: 217 PLPSPG-PDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 4 PPCTSPSK-PFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
PP +SP+ P S P PP TP SP P P D+ P+P
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTPGPDSPLPSPGP-DSPLPSP 277
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
RPP +P P S S P P+ P SP P +SP P PV
Sbjct: 395 RPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPV 448
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
PP SP+ C+RP PP P SP P P SP P
Sbjct: 522 PPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP-PEPYYYSSPPP 565
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.5 bits (68), Expect = 0.52
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVV--PPVSCWTPATVSPTPCPXTRDTHSPTPSCVXT-XPVAXXX 174
PP T+ + P + P PPVS P TP P T P P P
Sbjct: 39 PPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPP 98
Query: 175 XXXXXXXXXAGTXSLPPPSGKXCVTS 252
A T S PP S TS
Sbjct: 99 QPPQSPPASAPTVSPPPVSPPPAPTS 124
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
PP ++P+ S P P TPA+ P P SP P+ V PV
Sbjct: 104 PPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPPPV 156
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 31.5 bits (68), Expect = 0.52
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCP--XTRDTHSPTPSCVXTXPVAXXXX 177
PP P ++ S P PPV + P T SP P P T SP P V PV
Sbjct: 618 PPPPPPPTYYAVQSPPPPPPVY-YPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPP 676
Query: 178 XXXXXXXXAGTXSLPPPS 231
T S PPPS
Sbjct: 677 PPPPVYYPPVTQS-PPPS 693
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +1
Query: 49 PVVPPVSCWTPATVSPTPCPXTRD--THSPTPSCVXTXPVAXXXXXXXXXXXXAGTXSLP 222
P PP + P T SP P P T SP P V PV S P
Sbjct: 675 PPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSPP 734
Query: 223 PPS 231
PPS
Sbjct: 735 PPS 737
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSP 132
PC SP KP + +PV P PA +PTP P + SP
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPSP 137
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
P PS P +PV PP TP P P P +P P+
Sbjct: 48 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPA 92
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATV-SPTPCPXTRDTHSPTPSCV 147
PP P P +P PP P P PCP +PTP V
Sbjct: 64 PPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEG 119
PA+ QA L+L+A+ RT+GIV++ G V +P G
Sbjct: 232 PAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 3 PAMYVAIQAXLSLFASGRTTGIVLDSGDGVSHTVPXYEG 119
PA+ QA L+L+A+ RT+GIV++ G V +P G
Sbjct: 232 PAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHG 270
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.1 bits (67), Expect = 0.68
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
PP T PS P S + P PP S +P SP P P T T PTP
Sbjct: 529 PPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST-PPTP 570
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 40 CSRPVVPP-VSCWTPATVSPTPCPXTRDT-HSPTPSC 144
C R +PP +SC TP PCP + HS T C
Sbjct: 640 CGRTSIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXT 114
P SPS P P VP S TP+ SP P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 16 SPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCV 147
SP P + P +P S TP+ PTP T SP P+ V
Sbjct: 41 SPKVPSPKYPSPSIPSPSVPTPSV--PTPSVPTPSVPSPNPTPV 82
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 55 VPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVA 165
+PPV+ TP+ ++ P P T +PT S T PVA
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS-PTTSPVA 73
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/54 (40%), Positives = 24/54 (44%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVA 165
PP S P S S P PPV P TV+ +P P SP PS T P A
Sbjct: 58 PPVVSSPPPSS--SPPPSPPVITSPPPTVASSPPPPV-VIASPPPSTPATTPPA 108
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPV 162
PP + P P S PPV P + SP P P + PT + PV
Sbjct: 40 PPPSPPQSPPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPV 92
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1
Query: 16 SPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
SPS P S P PP TP+T S TP P T +H+PTP
Sbjct: 66 SPSTP----SHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1
Query: 16 SPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
SPS P S P PP TP+T S TP P T +H+PTP
Sbjct: 66 SPSTP----SHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPT 135
+PP P P+ C P P P TV P P P + PT
Sbjct: 62 KPPTVKPPPPYIPCPPPPYTP----KPPTVKPPPPPYVKPPPPPT 102
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVS-PTPCPXTRDTHSPTPSCVXTXPV 162
PP +P P +P PPV P T + PCP T P P T P+
Sbjct: 130 PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPPKPETCPI 183
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PP SP P S P PPV P V+P P + ++PTPS
Sbjct: 797 PPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/77 (27%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVV--PPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXX 177
PP SP P PV PP ++P +P P HSP P P
Sbjct: 715 PPVHSPPPPVHSPPPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSP 774
Query: 178 XXXXXXXXAGTXSLPPP 228
S PPP
Sbjct: 775 PPPVHSPPPPVHSPPPP 791
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTP 138
+PP P P + + P P PA V P P P + +P P
Sbjct: 79 KPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSAPQP 123
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 7 PCTSPSK-PFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVA 165
P T+P+K P + S PV P S + SP P P ++ P P+ + + PV+
Sbjct: 51 PTTAPAKTPTASASSPVESPKSPAPVSESSPPPTPVP-ESSPPVPAPMVSSPVS 103
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +2
Query: 14 RRHPSXSLAVRVRSYHRYRAGLRRRCLPHRAHXRGIRTPPRHPASGLXRSRPHRLPXEDP 193
RR PS SL+ R RSY R R+ +RRR R+ R+P R S R+R +D
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRARDRSPVLDDE 176
Query: 194 HRARVL 211
+++
Sbjct: 177 GSPKII 182
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +2
Query: 14 RRHPSXSLAVRVRSYHRYRAGLRRRCLPHRAHXRGIRTPPRHPASGLXRSRPHRLPXEDP 193
RR PS SL+ R RSY R R+ +RRR R+ R+P R S R+R +D
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRARDRSPVLDDE 187
Query: 194 HRARVL 211
+++
Sbjct: 188 GSPKII 193
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +2
Query: 14 RRHPSXSLAVRVRSYHRYRAGLRRRCLPHRAHXRGIRTPPRHPASGLXRSRPHRLPXEDP 193
RR PS SL+ R RSY R R+ +RRR R+ R+P R S R+R +D
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRARDRSPVLDDE 217
Query: 194 HRARVL 211
+++
Sbjct: 218 GSPKII 223
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXP 159
PP SP P S P P V P SP P HSP P V + P
Sbjct: 554 PPVHSPPPPVY--SSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPP 603
>At5g05760.1 68418.m00634 syntaxin 31 (SYP31) / SED5 identical to
SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis
thaliana}
Length = 336
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTP 81
PP +S S PF +P++PP++ P
Sbjct: 187 PPWSSSSNPFGNLQQPLLPPLNTGAP 212
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSP 96
P + P++PF+ P PPV P SP
Sbjct: 49 PSASQPTRPFTASGPPPAPPVGTMRPGQPSP 79
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
P PSK SR S P P++ + AT + P SP P+
Sbjct: 302 PTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSPAPA 346
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPT 135
PP P++ ++PV PPV ++ T P+ P T SP+
Sbjct: 122 PPSAFTIGPYAHETQPVTPPV--FSAFTTEPSTAPFTPPPESPS 163
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 16 SPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
SPS P S S P P TP+T S P P + + S PS
Sbjct: 124 SPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 4 PPCT-SPSKPFSRCSRPVVPPVSCWTPATVSPTP 102
PP T +P+ P + P+VPPV+ P T++P P
Sbjct: 50 PPVTITPTNPATTV--PIVPPVTTIPPPTLTPPP 81
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 95 PHRAHXRGIRTPPRHPASGLXRSRPHRLPXEDPHRARVLXHYHRRAGNXA*HQEK 259
PHRA RG R P +G R+ + P R++ +Y R + +E+
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQRERER 259
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 95 PHRAHXRGIRTPPRHPASGLXRSRPHRLPXEDPHRARVLXHYHRRAGNXA*HQEK 259
PHRA RG R P +G R+ + P R++ +Y R + +E+
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQRERER 267
>At4g30260.1 68417.m04302 integral membrane Yip1 family protein
contains Pfam domain, PF04893: Yip1 domain
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCP 108
RP S PF + + P +PP S + V P P P
Sbjct: 45 RPSIPVSSSPFVQSNLPPLPPSSSSSTQKVMPVPAP 80
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 7 PCTSPSKPFSRCSRPVVPPVSCWTPATVSP-TPCPXT 114
P +PS P P P S TP+T +P TP P T
Sbjct: 279 PTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPST 315
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PP PS P S PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PP PS P S PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPS 141
PP PS P S PV+PP+ + P + D H PS
Sbjct: 18 PPHHPPSSPVPVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPS 63
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXT--RDTHSPTPSCVXTXPVAXXXX 177
PP SP P S P PPV P SP P + HSP P P
Sbjct: 522 PPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPP 581
Query: 178 XXXXXXXXAGTXSLPPP 228
S PPP
Sbjct: 582 PPVYSPPPPPVHSPPPP 598
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = +1
Query: 4 PPCTSP-SKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXXX 180
PP T P KP + P PP T P P P R +P P P
Sbjct: 493 PPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPP----PPPPPGTAAA 548
Query: 181 XXXXXXXAGTXSLPPP 228
GT + PPP
Sbjct: 549 PPPPPPPPGTQAAPPP 564
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 RPPCTSPSKPFSRCSRPVVPP-VSCWTPATVSPTPCPXTRDTHSPTPS 141
+PP TSP P S ++ PP + P P P SP PS
Sbjct: 42 QPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPS 89
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +1
Query: 16 SPSKPFSRCSRPVVPPVSCWTPATVSP----TPCPXTRDTHSPT 135
+PS P S PV PP TP+ SP P P D + T
Sbjct: 89 NPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPPSPGANDDRNRT 132
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 66 IVLDSGDGVSHTVPXYEGYALPHAIXXXXXXXXXXXXYLMKILTER 203
+V+D G +H VP + L HAI YL ++++ R
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR 200
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/75 (26%), Positives = 24/75 (32%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCPXTRDTHSPTPSCVXTXPVAXXXXXX 183
PP P P SR + PP++ P P P P P+PS P
Sbjct: 573 PPPPPPPPPLP--SRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGS 630
Query: 184 XXXXXXAGTXSLPPP 228
A PPP
Sbjct: 631 TGNKRQAQPPPPPPP 645
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPVSCWTPATVSPTPCP 108
PP + P P + P+ PP S P +SP P P
Sbjct: 1087 PPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSP 1121
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 4 PPCTSPSKPFSRCSRPVVPPV-SCWTPATVSPTPCPXTRD 120
PPC P P P +PP PA P P P T D
Sbjct: 77 PPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPD 116
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,143,499
Number of Sequences: 28952
Number of extensions: 246797
Number of successful extensions: 1086
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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