Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0106
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   0.89 
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   2.7  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   3.6  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   3.6  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   3.6  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.7  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.7  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.7  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   4.7  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.7  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   6.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   6.3  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 12/162 (7%)
 Frame = +2

Query: 56   PGRVALVADGPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTA 235
            P R A V  GPL G+ VSV  V +  R+     G     ++ R       + RL  A  A
Sbjct: 1037 PTRAAAVDAGPLDGEQVSVDGVAELFRS---NRGRARRTRRGRRRAEERVEVRLASAMAA 1093

Query: 236  PTRLVRKRGQMLNSMKNGQKVNG------------PRS*RTKRSAHK*QITIGSS*QLHE 379
              R   +   +L +    ++               P S RT R+ H+ ++ +    +   
Sbjct: 1094 AER--EREDSILMAAVRAEEAGEAPPPIPMRRRGLPPSPRTVRARHERRLYLQRLYRQRA 1151

Query: 380  LRGTVPGLPYSRA*RXRLSVLXPSARKISLKRLRKKCAPRRR 505
              GT+P +P+ R  R R +   PS      +R+R++   R R
Sbjct: 1152 REGTLPTVPHGRNRRSRSA---PSEADTIRRRMRRREMERLR 1190


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 170 RQQIRLNQLHLTKFRLKYAFTAPTRLVRK--RGQMLNSM 280
           R+ I L+ LH   + L Y  T P R+VRK  RG++   M
Sbjct: 200 REDIGLS-LHHWHWHLVYPATGPDRVVRKDRRGELFYHM 237


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 210 PPPPPTTTTTVWIDPTATTTTHVP 233


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHVP 234


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHVP 234


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 210 PPPPPTTTTTVWIDPTATTTTHAP 233


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -2

Query: 162 PLPGPSTSARVW-SITSTTLTNFP 94
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 58  WFYVPCKRQNVLXTSLVP 5
           WFYV CK    L  S +P
Sbjct: 435 WFYVDCKSSKNLYDSNLP 452


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 58  WFYVPCKRQNVLXTSLVP 5
           WFYV CK    L  S +P
Sbjct: 443 WFYVDCKSSKNLYDSNLP 460


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,485
Number of Sequences: 2352
Number of extensions: 11298
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)