Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0105
(661 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 27 0.14
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.9
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.9
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 5.1
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 9.0
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 27.1 bits (57), Expect = 0.14
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 369 IMIGHTSCTICTRDLKISKCPCPLLATPRTVC 464
I G SCT+CT D K + C + + C
Sbjct: 767 IPTGFDSCTVCTCDAKYLEIKCKRIYNEKQCC 798
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 17 APGHGLQPTMGDYTQL 32
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 APGSGVQNTHIQYTQL 591
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 301 WTVIIFRVLCTNWNGVSTNCFR 366
WT+ L W+ STNC R
Sbjct: 246 WTIYEMYHLAILWSCTSTNCPR 267
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 557 PDPGACCPCI 528
PDPG+C P +
Sbjct: 45 PDPGSCDPSV 54
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,838
Number of Sequences: 336
Number of extensions: 3701
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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