BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0100
(666 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 27 0.53
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 2.8
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 27.1 bits (57), Expect = 0.53
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 507 PLSNTYCSFEIHLQNVKIAVEFAVNNCSVCVLNGFAXIAV 626
P N + SF HLQ+ FAVNN + G I +
Sbjct: 470 PQGNVFASFT-HLQHAPFTYRFAVNNTTGAARRGTCRIFI 508
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.6 bits (51), Expect = 2.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 364 RNLKIYLNIISNFDISYERNLSQIYGWQDDEPNI 465
R L + N ISN D + R+++ +YG + E NI
Sbjct: 455 RTLDLGENHISNIDNASFRHMAHLYGLRLTENNI 488
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,169
Number of Sequences: 2352
Number of extensions: 12038
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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