Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0100
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-759|AAF54245.2|  389|Drosophila melanogaster CG17911-PA...    34   0.20 
AY061453-1|AAL29001.1|  985|Drosophila melanogaster LD39136p pro...    30   3.3  
AE013599-1040|AAF58831.2|  985|Drosophila melanogaster CG18011-P...    30   3.3  
AE014297-758|AAF54244.2|  390|Drosophila melanogaster CG11735-PA...    29   4.3  

>AE014297-759|AAF54245.2|  389|Drosophila melanogaster CG17911-PA
           protein.
          Length = 389

 Score = 33.9 bits (74), Expect = 0.20
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = -2

Query: 227 N*LYGLQILLRFFFRDNFVTLRGFKYSRGKEPQVRLLVFVFLFHKLTRL 81
           N ++G+ +LL F      +   GF+ + G  P + + +F+FLF  L+++
Sbjct: 258 NDIFGIPLLLNFMVSTFVICFVGFQMTVGVPPDIMIKLFLFLFSSLSQV 306


>AY061453-1|AAL29001.1|  985|Drosophila melanogaster LD39136p
           protein.
          Length = 985

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 333 FCSMCVHTLPSWIQ-NFANVFLISKNR-RGCT*CVY 232
           +C MC    PSW + NF + F + K+R R C  C Y
Sbjct: 429 YCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDY 464


>AE013599-1040|AAF58831.2|  985|Drosophila melanogaster CG18011-PA
           protein.
          Length = 985

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 333 FCSMCVHTLPSWIQ-NFANVFLISKNR-RGCT*CVY 232
           +C MC    PSW + NF + F + K+R R C  C Y
Sbjct: 429 YCEMCSLEFPSWKRFNFHSQFHLEKHRPRACFVCDY 464


>AE014297-758|AAF54244.2|  390|Drosophila melanogaster CG11735-PA
           protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 12/49 (24%), Positives = 27/49 (55%)
 Frame = -2

Query: 227 N*LYGLQILLRFFFRDNFVTLRGFKYSRGKEPQVRLLVFVFLFHKLTRL 81
           N ++G+ +LL F      +   GF+ + G  P + + +F+FL   ++++
Sbjct: 259 NDIFGIPLLLNFMVSSFVICFVGFQMTVGVPPDIVVKLFLFLVSSMSQV 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,341,784
Number of Sequences: 53049
Number of extensions: 495275
Number of successful extensions: 964
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)