Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0079
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36188-1|AAA93254.1| 435|Homo sapiens assembly protein 50 protein. 143 6e-34
D63475-1|BAA09762.2| 438|Homo sapiens KIAA0109 protein. 143 6e-34
BT007308-1|AAP35972.1| 435|Homo sapiens adaptor-related protein... 143 6e-34
BC014030-1|AAH14030.1| 435|Homo sapiens adaptor-related protein... 143 6e-34
BC013796-1|AAH13796.1| 433|Homo sapiens adaptor-related protein... 143 6e-34
BC004996-1|AAH04996.1| 435|Homo sapiens adaptor-related protein... 143 6e-34
BC005021-1|AAH05021.1| 425|Homo sapiens adaptor-related protein... 46 1e-04
BC003612-1|AAH03612.1| 423|Homo sapiens adaptor-related protein... 46 1e-04
BC003387-1|AAH03387.1| 423|Homo sapiens adaptor-related protein... 46 1e-04
AK222946-1|BAD96666.1| 423|Homo sapiens adaptor-related protein... 46 1e-04
AF020797-1|AAD25870.2| 423|Homo sapiens AP-mu chain family memb... 46 1e-04
DQ059565-1|AAY54246.1| 435|Homo sapiens leukemia T cell specifi... 44 5e-04
BC017469-1|AAH17469.1| 423|Homo sapiens adaptor-related protein... 44 5e-04
AF290613-1|AAK28024.1| 423|Homo sapiens clathrin-associated pro... 44 5e-04
AB209808-1|BAD93045.1| 466|Homo sapiens adaptor-related protein... 44 5e-04
BC048979-1|AAH48979.1| 157|Homo sapiens Rieske (Fe-S) domain co... 30 8.2
BC035110-1|AAH35110.1| 157|Homo sapiens Rieske (Fe-S) domain co... 30 8.2
BC024023-1|AAH24023.1| 157|Homo sapiens RFESD protein protein. 30 8.2
>U36188-1|AAA93254.1| 435|Homo sapiens assembly protein 50 protein.
Length = 435
Score = 143 bits (346), Expect = 6e-34
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381
Query: 203 TRPPISMGFEVPFAPSG 253
RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398
Score = 83.8 bits (198), Expect = 5e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
+KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>D63475-1|BAA09762.2| 438|Homo sapiens KIAA0109 protein.
Length = 438
Score = 143 bits (346), Expect = 6e-34
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 325 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 384
Query: 203 TRPPISMGFEVPFAPSG 253
RPPISM FEVPFAPSG
Sbjct: 385 ARPPISMNFEVPFAPSG 401
Score = 83.8 bits (198), Expect = 5e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
+KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 402 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 438
>BT007308-1|AAP35972.1| 435|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 435
Score = 143 bits (346), Expect = 6e-34
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381
Query: 203 TRPPISMGFEVPFAPSG 253
RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398
Score = 83.8 bits (198), Expect = 5e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
+KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>BC014030-1|AAH14030.1| 435|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 435
Score = 143 bits (346), Expect = 6e-34
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381
Query: 203 TRPPISMGFEVPFAPSG 253
RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398
Score = 83.8 bits (198), Expect = 5e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
+KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>BC013796-1|AAH13796.1| 433|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 433
Score = 143 bits (346), Expect = 6e-34
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 320 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 379
Query: 203 TRPPISMGFEVPFAPSG 253
RPPISM FEVPFAPSG
Sbjct: 380 ARPPISMNFEVPFAPSG 396
Score = 83.8 bits (198), Expect = 5e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
+KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 397 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 433
>BC004996-1|AAH04996.1| 435|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 435
Score = 143 bits (346), Expect = 6e-34
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
V+I TPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEIELL T+ KKKW
Sbjct: 322 VRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKW 381
Query: 203 TRPPISMGFEVPFAPSG 253
RPPISM FEVPFAPSG
Sbjct: 382 ARPPISMNFEVPFAPSG 398
Score = 83.8 bits (198), Expect = 5e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
+KVRYLKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 399 LKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>BC005021-1|AAH05021.1| 425|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit protein.
Length = 425
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
G AKY N ++W IK G KE + A L + ++ RPPI + FE+P+
Sbjct: 332 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPRVEKEEVEGRPPIGVKFEIPY 386
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
I+VRY+K+ E S + + WVRYI +SG Y+ R
Sbjct: 392 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 423
>BC003612-1|AAH03612.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit protein.
Length = 423
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
G AKY N ++W IK G KE + A L + ++ RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
I+VRY+K+ E S + + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421
>BC003387-1|AAH03387.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit protein.
Length = 423
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
G AKY N ++W IK G KE + A L + ++ RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
I+VRY+K+ E S + + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421
>AK222946-1|BAD96666.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit variant protein.
Length = 423
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
G AKY N ++W IK G KE + A L + ++ RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
I+VRY+K+ E S + + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421
>AF020797-1|AAD25870.2| 423|Homo sapiens AP-mu chain family member
mu1B protein.
Length = 423
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVPF 241
G AKY N ++W IK G KE + A L + ++ RPPI + FE+P+
Sbjct: 330 GSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPY 384
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 253 IKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
I+VRY+K+ E S + + WVRYI +SG Y+ R
Sbjct: 390 IQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 421
>DQ059565-1|AAY54246.1| 435|Homo sapiens leukemia T cell specific
adaptor-related protein 1 mu1 subunit protein.
Length = 435
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
G K+ + IVW IK G KE + A L + + K +PPIS+ FE+P F SG
Sbjct: 342 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 401
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 399 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 433
>BC017469-1|AAH17469.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 1 subunit protein.
Length = 423
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
G K+ + IVW IK G KE + A L + + K +PPIS+ FE+P F SG
Sbjct: 330 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 389
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 387 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 421
>AF290613-1|AAK28024.1| 423|Homo sapiens clathrin-associated
protein AP47 protein.
Length = 423
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
G K+ + IVW IK G KE + A L + + K +PPIS+ FE+P F SG
Sbjct: 330 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 389
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 387 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 421
>AB209808-1|BAD93045.1| 466|Homo sapiens adaptor-related protein
complex 1, mu 1 subunit variant protein.
Length = 466
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 253
G K+ + IVW IK G KE + A L + + K +PPIS+ FE+P F SG
Sbjct: 373 GSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSG 432
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 430 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 464
>BC048979-1|AAH48979.1| 157|Homo sapiens Rieske (Fe-S) domain
containing protein.
Length = 157
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 95 LYTSLSPSSKSVAPRWCSAELKSSL 21
LY S++P S P+WCS +K +
Sbjct: 95 LYQSINPKDPSAKPKWCSKGIKQRI 119
>BC035110-1|AAH35110.1| 157|Homo sapiens Rieske (Fe-S) domain
containing protein.
Length = 157
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 95 LYTSLSPSSKSVAPRWCSAELKSSL 21
LY S++P S P+WCS +K +
Sbjct: 95 LYQSINPKDPSAKPKWCSKGIKQRI 119
>BC024023-1|AAH24023.1| 157|Homo sapiens RFESD protein protein.
Length = 157
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 95 LYTSLSPSSKSVAPRWCSAELKSSL 21
LY S++P S P+WCS +K +
Sbjct: 95 LYQSINPKDPSAKPKWCSKGIKQRI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,922,319
Number of Sequences: 237096
Number of extensions: 1320005
Number of successful extensions: 3595
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3595
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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