Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0079
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p pro... 157 9e-39
AJ005962-1|CAA06785.1| 437|Drosophila melanogaster clathrin-ass... 157 9e-39
AF110232-1|AAF14248.1| 437|Drosophila melanogaster clathrin-ass... 157 9e-39
AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB... 157 9e-39
AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA... 157 9e-39
BT001492-1|AAN71247.1| 225|Drosophila melanogaster LD27989p pro... 44 2e-04
AY058621-1|AAL13850.1| 426|Drosophila melanogaster LD31377p pro... 44 2e-04
AJ006219-1|CAA06918.1| 426|Drosophila melanogaster clathrin-ass... 44 2e-04
AF110231-1|AAF14247.1| 426|Drosophila melanogaster clathrin-ass... 44 2e-04
AE014297-967|AAF54399.1| 426|Drosophila melanogaster CG9388-PA ... 44 2e-04
AF145602-1|AAD38577.1| 280|Drosophila melanogaster BcDNA.GH0243... 32 0.78
AE014297-1664|AAF54932.1| 280|Drosophila melanogaster CG8790-PB... 32 0.78
AE014297-1663|AAF54933.1| 280|Drosophila melanogaster CG8790-PA... 32 0.78
>AY070712-1|AAL48183.1| 437|Drosophila melanogaster SD05403p
protein.
Length = 437
Score = 157 bits (382), Expect = 9e-39
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
VKI TPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW
Sbjct: 324 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 383
Query: 203 TRPPISMGFEVPFAPSG 253
TRPPISM FEVPFAPSG
Sbjct: 384 TRPPISMNFEVPFAPSG 400
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 256 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
KVRYLKVFEPKLNYSDHDV+KWVRYIGRSGLYETRC
Sbjct: 402 KVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETRC 437
>AJ005962-1|CAA06785.1| 437|Drosophila melanogaster
clathrin-associated protein protein.
Length = 437
Score = 157 bits (382), Expect = 9e-39
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
VKI TPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW
Sbjct: 324 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 383
Query: 203 TRPPISMGFEVPFAPSG 253
TRPPISM FEVPFAPSG
Sbjct: 384 TRPPISMNFEVPFAPSG 400
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 256 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
KVRYLKVFEPKLNYSDHDV+KWVRYIGRSGLYETRC
Sbjct: 402 KVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETRC 437
>AF110232-1|AAF14248.1| 437|Drosophila melanogaster
clathrin-associated adaptor complexAP-2 medium chain
protein.
Length = 437
Score = 157 bits (382), Expect = 9e-39
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
VKI TPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW
Sbjct: 324 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 383
Query: 203 TRPPISMGFEVPFAPSG 253
TRPPISM FEVPFAPSG
Sbjct: 384 TRPPISMNFEVPFAPSG 400
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 256 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
KVRYLKVFEPKLNYSDHDV+KWVRYIGRSGLYETRC
Sbjct: 402 KVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETRC 437
>AE014297-3160|AAF56002.3| 437|Drosophila melanogaster CG7057-PB,
isoform B protein.
Length = 437
Score = 157 bits (382), Expect = 9e-39
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
VKI TPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW
Sbjct: 324 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 383
Query: 203 TRPPISMGFEVPFAPSG 253
TRPPISM FEVPFAPSG
Sbjct: 384 TRPPISMNFEVPFAPSG 400
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 256 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
KVRYLKVFEPKLNYSDHDV+KWVRYIGRSGLYETRC
Sbjct: 402 KVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETRC 437
>AE014297-3159|AAF56001.1| 437|Drosophila melanogaster CG7057-PA,
isoform A protein.
Length = 437
Score = 157 bits (382), Expect = 9e-39
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 23 VKILTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 202
VKI TPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW
Sbjct: 324 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKW 383
Query: 203 TRPPISMGFEVPFAPSG 253
TRPPISM FEVPFAPSG
Sbjct: 384 TRPPISMNFEVPFAPSG 400
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 256 KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 363
KVRYLKVFEPKLNYSDHDV+KWVRYIGRSGLYETRC
Sbjct: 402 KVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETRC 437
>BT001492-1|AAN71247.1| 225|Drosophila melanogaster LD27989p
protein.
Length = 225
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWT-RPPISMGFEVP-FAPS 250
G KY +NAI+W IK G KE + A L +++ +PPI + FE+P F S
Sbjct: 131 GSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTS 190
Query: 251 G 253
G
Sbjct: 191 G 191
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 189 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 223
>AY058621-1|AAL13850.1| 426|Drosophila melanogaster LD31377p
protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWT-RPPISMGFEVP-FAPS 250
G KY +NAI+W IK G KE + A L +++ +PPI + FE+P F S
Sbjct: 332 GSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTS 391
Query: 251 G 253
G
Sbjct: 392 G 392
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 390 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 424
>AJ006219-1|CAA06918.1| 426|Drosophila melanogaster
clathrin-associated protein protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWT-RPPISMGFEVP-FAPS 250
G KY +NAI+W IK G KE + A L +++ +PPI + FE+P F S
Sbjct: 332 GSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTS 391
Query: 251 G 253
G
Sbjct: 392 G 392
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 390 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 424
>AF110231-1|AAF14247.1| 426|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 medium chain
protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWT-RPPISMGFEVP-FAPS 250
G KY +NAI+W IK G KE + A L +++ +PPI + FE+P F S
Sbjct: 332 GSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTS 391
Query: 251 G 253
G
Sbjct: 392 G 392
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 390 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 424
>AE014297-967|AAF54399.1| 426|Drosophila melanogaster CG9388-PA
protein.
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWT-RPPISMGFEVP-FAPS 250
G KY +NAI+W IK G KE + A L +++ +PPI + FE+P F S
Sbjct: 332 GSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTS 391
Query: 251 G 253
G
Sbjct: 392 G 392
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 244 TLRIKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 360
T I+VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 390 TSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 424
>AF145602-1|AAD38577.1| 280|Drosophila melanogaster BcDNA.GH02431
protein.
Length = 280
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 357 GLVESGASDVAHPLDDVMVRVIQLRFEHLQVANLDPEGAK 238
GL GA+ V HPLD + V +Q + HL VA L P+ A+
Sbjct: 14 GLASVGAAMVTHPLDLIKV-TLQTQQGHLSVAQLIPKLAR 52
>AE014297-1664|AAF54932.1| 280|Drosophila melanogaster CG8790-PB,
isoform B protein.
Length = 280
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 357 GLVESGASDVAHPLDDVMVRVIQLRFEHLQVANLDPEGAK 238
GL GA+ V HPLD + V +Q + HL VA L P+ A+
Sbjct: 14 GLASVGAAMVTHPLDLIKV-TLQTQQGHLSVAQLIPKLAR 52
>AE014297-1663|AAF54933.1| 280|Drosophila melanogaster CG8790-PA,
isoform A protein.
Length = 280
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3
Query: 357 GLVESGASDVAHPLDDVMVRVIQLRFEHLQVANLDPEGAK 238
GL GA+ V HPLD + V +Q + HL VA L P+ A+
Sbjct: 14 GLASVGAAMVTHPLDLIKV-TLQTQQGHLSVAQLIPKLAR 52
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,657,719
Number of Sequences: 53049
Number of extensions: 407532
Number of successful extensions: 1196
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -