Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0073
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450 pr...    27   0.41 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.3  
Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           23   8.8  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   8.8  

>AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 191 PDVRGRDADVLVPDPEAGRQAQLYSGLNMG 280
           PD  G D D  +P+   GR    Y+  +MG
Sbjct: 52  PDAEGFDPDRFLPERSQGRHPHAYAPFSMG 81


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 591 MSLCYWISFRRNLCPSFFF-RVYGLV 517
           M++CYW+  +  L  +FF   +Y LV
Sbjct: 617 MAICYWMKQKYQLIAAFFISAIYSLV 642


>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -3

Query: 347 RRACGAINSSCSWAVRAAACWGGPC*GPSTAALVGRL 237
           R  CG    S  W + AA C      G ST++L  RL
Sbjct: 70  RHNCGGSVLSSKWVLTAAHCTA----GASTSSLTVRL 102


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 188 RPDVRGRDADVLVPDPEAGRQAQLYSGLNMGRPNTPPRAQPKNK 319
           +P  RG+ A ++    E G  A + +     RP  PP+  P+ K
Sbjct: 612 QPYCRGKSATMIDGCFEEGENAIVPTPPTTRRPIAPPKNFPRGK 655


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,852
Number of Sequences: 2352
Number of extensions: 15421
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)