Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0054
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR450316-1|CAG29312.1| 391|Homo sapiens DNMT2 protein. 60 7e-09
BC047733-1|AAH47733.1| 391|Homo sapiens tRNA aspartic acid meth... 60 7e-09
AL133415-5|CAB87964.1| 391|Homo sapiens tRNA aspartic acid meth... 60 7e-09
AJ223333-1|CAA11272.1| 391|Homo sapiens DNA methyltransferase p... 60 7e-09
AF045888-1|AAC39764.1| 391|Homo sapiens putative DNA cytosine m... 60 7e-09
AF012128-1|AAC51939.1| 391|Homo sapiens putative DNA methyltran... 60 7e-09
>CR450316-1|CAG29312.1| 391|Homo sapiens DNMT2 protein.
Length = 391
Score = 60.1 bits (139), Expect = 7e-09
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +1
Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQILFD 396
KEI L+ FP E+ FP+ +T KQ YRLLGNS+NV V+++L++IL++
Sbjct: 346 KEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 20 LVPXXMLXKANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDI 163
L P +L A + DI RS CFTK Y Y+EGTGSV +T+ D+
Sbjct: 268 LPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVL-QTAEDV 314
>BC047733-1|AAH47733.1| 391|Homo sapiens tRNA aspartic acid
methyltransferase 1 protein.
Length = 391
Score = 60.1 bits (139), Expect = 7e-09
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +1
Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQILFD 396
KEI L+ FP E+ FP+ +T KQ YRLLGNS+NV V+++L++IL++
Sbjct: 346 KEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 20 LVPXXMLXKANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDI 163
L P +L A + DI RS CFTK Y Y+EGTGSV +T+ D+
Sbjct: 268 LPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVL-QTAEDV 314
>AL133415-5|CAB87964.1| 391|Homo sapiens tRNA aspartic acid
methyltransferase 1 protein.
Length = 391
Score = 60.1 bits (139), Expect = 7e-09
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +1
Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQILFD 396
KEI L+ FP E+ FP+ +T KQ YRLLGNS+NV V+++L++IL++
Sbjct: 346 KEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 20 LVPXXMLXKANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDI 163
L P +L A + DI RS CFTK Y Y+EGTGSV +T+ D+
Sbjct: 268 LPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVL-QTAEDV 314
>AJ223333-1|CAA11272.1| 391|Homo sapiens DNA methyltransferase
protein.
Length = 391
Score = 60.1 bits (139), Expect = 7e-09
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +1
Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQILFD 396
KEI L+ FP E+ FP+ +T KQ YRLLGNS+NV V+++L++IL++
Sbjct: 346 KEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 20 LVPXXMLXKANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDI 163
L P +L A + DI RS CFTK Y Y+EGTGSV +T+ D+
Sbjct: 268 LPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVL-QTAEDV 314
>AF045888-1|AAC39764.1| 391|Homo sapiens putative DNA cytosine
methyltransferase DNMT2 protein.
Length = 391
Score = 60.1 bits (139), Expect = 7e-09
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +1
Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQILFD 396
KEI L+ FP E+ FP+ +T KQ YRLLGNS+NV V+++L++IL++
Sbjct: 346 KEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 20 LVPXXMLXKANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDI 163
L P +L A + DI RS CFTK Y Y+EGTGSV +T+ D+
Sbjct: 268 LPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVL-QTAEDV 314
>AF012128-1|AAC51939.1| 391|Homo sapiens putative DNA
methyltransferase protein.
Length = 391
Score = 60.1 bits (139), Expect = 7e-09
Identities = 25/46 (54%), Positives = 37/46 (80%)
Frame = +1
Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQILFD 396
KEI L+ FP E+ FP+ +T KQ YRLLGNS+NV V+++L++IL++
Sbjct: 346 KEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 44.0 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 20 LVPXXMLXKANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDI 163
L P +L A + DI RS CFTK Y Y+EGTGSV +T+ D+
Sbjct: 268 LPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEGTGSVL-QTAEDV 314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,479,034
Number of Sequences: 237096
Number of extensions: 1372674
Number of successful extensions: 5460
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5460
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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