Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0054
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118475-1|AAM49844.1|  331|Drosophila melanogaster GM14972p pro...    60   3e-09
AF185647-1|AAF03835.1|  345|Drosophila melanogaster DNA (5-cytos...    60   3e-09
AE014134-2157|AAF53163.1|  345|Drosophila melanogaster CG10692-P...    60   3e-09
AE014134-2156|ABI31309.1|  345|Drosophila melanogaster CG10692-P...    60   3e-09
BT023180-1|AAY55596.1|  118|Drosophila melanogaster IP03266p pro...    31   1.8  
BT023152-1|AAY55568.1|  113|Drosophila melanogaster IP03466p pro...    31   1.8  
BT023141-1|AAY55557.1|  120|Drosophila melanogaster IP03566p pro...    31   1.8  
BT003637-1|AAO39641.1|  525|Drosophila melanogaster AT18606p pro...    30   3.2  
AE014134-1160|AAF52434.2|  492|Drosophila melanogaster CG11322-P...    30   3.2  
S71762-1|AAB31734.3|  297|Drosophila melanogaster ADP/ATP transl...    28   9.8  

>AY118475-1|AAM49844.1|  331|Drosophila melanogaster GM14972p
           protein.
          Length = 331

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +1

Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQIL 390
           +E+ +LMSFP  + FP   T +Q YRLLGNS+NVKV+ EL+++L
Sbjct: 285 REVARLMSFPENFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 328



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  DYLVPXXMLXK-ANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDIVQKYLKLAN 190
           D+LVP  +L K   + DI +   +RS CFTK YTHY EGTGS +T  S D   +  +L  
Sbjct: 192 DFLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDESHRIFELVK 251

Query: 191 YFEVGSDE 214
             +  + +
Sbjct: 252 EIDTSNQD 259


>AF185647-1|AAF03835.1|  345|Drosophila melanogaster DNA
           (5-cytosine) methyltransferasehomolog protein.
          Length = 345

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +1

Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQIL 390
           +E+ +LMSFP  + FP   T +Q YRLLGNS+NVKV+ EL+++L
Sbjct: 299 REVARLMSFPENFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 342



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  DYLVPXXMLXK-ANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDIVQKYLKLAN 190
           D+LVP  +L K   + DI +   +RS CFTK YTHY EGTGS +T  S D   +  +L  
Sbjct: 206 DFLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDESHRIFELVK 265

Query: 191 YFEVGSDE 214
             +  + +
Sbjct: 266 EIDTSNQD 273


>AE014134-2157|AAF53163.1|  345|Drosophila melanogaster CG10692-PA,
           isoform A protein.
          Length = 345

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +1

Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQIL 390
           +E+ +LMSFP  + FP   T +Q YRLLGNS+NVKV+ EL+++L
Sbjct: 299 REVARLMSFPENFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 342



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  DYLVPXXMLXK-ANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDIVQKYLKLAN 190
           D+LVP  +L K   + DI +   +RS CFTK YTHY EGTGS +T  S D   +  +L  
Sbjct: 206 DFLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDESHRIFELVK 265

Query: 191 YFEVGSDE 214
             +  + +
Sbjct: 266 EIDTSNQD 273


>AE014134-2156|ABI31309.1|  345|Drosophila melanogaster CG10692-PC,
           isoform C protein.
          Length = 345

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +1

Query: 259 KEILQLMSFPSEYSFPKTVTRKQCYRLLGNSVNVKVISELLQIL 390
           +E+ +LMSFP  + FP   T +Q YRLLGNS+NVKV+ EL+++L
Sbjct: 299 REVARLMSFPENFEFPPETTNRQKYRLLGNSINVKVVGELIKLL 342



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 14  DYLVPXXMLXK-ANIFDICYADSNRSCCFTKAYTHYVEGTGSVFTETSYDIVQKYLKLAN 190
           D+LVP  +L K   + DI +   +RS CFTK YTHY EGTGS +T  S D   +  +L  
Sbjct: 206 DFLVPDDVLTKRVLVMDIIHPAQSRSMCFTKGYTHYTEGTGSAYTPLSEDESHRIFELVK 265

Query: 191 YFEVGSDE 214
             +  + +
Sbjct: 266 EIDTSNQD 273


>BT023180-1|AAY55596.1|  118|Drosophila melanogaster IP03266p
           protein.
          Length = 118

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 65  CYADSNRSCCFTKAYTHYVEGTGS 136
           C+ +S   CC+TKA   +  GTGS
Sbjct: 15  CFGESGADCCWTKAKLLFTMGTGS 38


>BT023152-1|AAY55568.1|  113|Drosophila melanogaster IP03466p
           protein.
          Length = 113

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 65  CYADSNRSCCFTKAYTHYVEGTGS 136
           C+ +S   CC+TKA   +  GTGS
Sbjct: 10  CFGESGADCCWTKAKLLFTMGTGS 33


>BT023141-1|AAY55557.1|  120|Drosophila melanogaster IP03566p
           protein.
          Length = 120

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 65  CYADSNRSCCFTKAYTHYVEGTGS 136
           C+ +S   CC+TKA   +  GTGS
Sbjct: 17  CFGESGADCCWTKAKLLFTMGTGS 40


>BT003637-1|AAO39641.1|  525|Drosophila melanogaster AT18606p
           protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -1

Query: 413 LLYSYSSNKICNNSLITLTFTLFPRSL*HCFLVTVLGKLYSLGNDINCKISLD 255
           L Y  ++ KIC  +L  + F +F  ++ HC L   +   +++     C++++D
Sbjct: 309 LTYRQNNFKICKVALAKVLFNIFNHAIFHCGLQVPIVWKHAMHTRCTCQLTVD 361


>AE014134-1160|AAF52434.2|  492|Drosophila melanogaster CG11322-PA
           protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -1

Query: 413 LLYSYSSNKICNNSLITLTFTLFPRSL*HCFLVTVLGKLYSLGNDINCKISLD 255
           L Y  ++ KIC  +L  + F +F  ++ HC L   +   +++     C++++D
Sbjct: 276 LTYRQNNFKICKVALAKVLFNIFNHAIFHCGLQVPIVWKHAMHTRCTCQLTVD 328


>S71762-1|AAB31734.3|  297|Drosophila melanogaster ADP/ATP
           translocase protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 71  ADSNRSCCFTKAYTHYVEGTGSVFTETSYDIVQKYL 178
           A     C F  A+++ + GTG  F    YD ++K L
Sbjct: 262 AKQEAPCFFKGAFSNILRGTGGAFVLVLYDEIKKVL 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,147,286
Number of Sequences: 53049
Number of extensions: 430244
Number of successful extensions: 1055
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)