Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0048
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   6.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.3  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   8.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.4  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 616 YTHNCWCW 639
           Y ++CWCW
Sbjct: 518 YMNSCWCW 525


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 296  SASENQVSLGSKSAGAP-QSSGKSHDEPKTAP 204
            S S    S+G KSA  P  ++G  H +P + P
Sbjct: 1362 SLSSASGSIGPKSADQPGAAAGLHHQQPSSPP 1393


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 235 GNLMTNPRRHQNQRQSEKSARGRLVESSMAVS*TY 131
           G+     ++HQ Q+Q  K  +  L+E S   + T+
Sbjct: 364 GSSQQQQQQHQQQQQKRKRPKPELIEISPGQNETF 398


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 397  RSHFGVKRCWTTDGKII 347
            R+HFG ++ WT D  +I
Sbjct: 1345 RNHFGKEKKWTFDKTLI 1361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,339
Number of Sequences: 2352
Number of extensions: 13057
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)