Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0044
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    25   0.55 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.8  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 289 HGEEQKKNEIASFQHLSYYSPHDNLERKKYI 381
           H  +   +E    QHL  +  HD LER+ +I
Sbjct: 115 HQSKFNPHEEVKLQHLHQFPHHDFLEREGFI 145


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 262 FWGIIKKVPRPLAYCIL 212
           FW  +  +P+P AY I+
Sbjct: 26  FWECLAPIPQPPAYPII 42


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 262 FWGIIKKVPRPLAYCIL 212
           FW  +  +P+P AY I+
Sbjct: 26  FWECLAPIPQPPAYPII 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,202
Number of Sequences: 336
Number of extensions: 4288
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)