Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0039
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    26   0.31 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    26   0.31 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   1.6  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   1.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   1.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.8  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
 Frame = +2

Query: 263 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKD 361
           L E      NVD G R  L    S PHC   YG F D
Sbjct: 68  LTENCDYIHNVDCGDRTQLEPPISSPHCERLYGIFAD 104


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
 Frame = +2

Query: 263 LAEEDSCYQNVDQGCRRTL----SLPHCSAYYGQFKD 361
           L E      NVD G R  L    S PHC   YG F D
Sbjct: 68  LTENCDYIHNVDCGDRTQLEPPISSPHCERLYGIFAD 104


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 165 DVCRKYCLYTHWRRRRLPTMTRLDENVR 82
           ++CRK C  T + +  + T+ R DE  +
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQ 110


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 165 DVCRKYCLYTHWRRRRLPTMTRLDENVR 82
           ++CRK C  T + +  + T+ R DE  +
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQ 110


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 412 TFLPLSPVGLLLQQLPDEQGRIREALQEIIGR 507
           T + +S + L L  L D Q ++RE +  ++G+
Sbjct: 1   TSMAISFILLTLANLQDIQTKVREEILSVVGK 32


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 335 SAYYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQT 463
           S Y  Q    H++   +    + YL   Y  +L    FNNYQ+
Sbjct: 481 SNYTKQQSKIHLIVRSV--FVTTYLMFDYCTVLRVQRFNNYQS 521


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 487 ELRESFPVRLVVVEVGGRQEI 425
           EL+  FP   V++ VGG ++I
Sbjct: 86  ELKRRFPGLRVLLSVGGGEDI 106


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 186 EKITSAFDVCRKYCLYTH 133
           + I    DVC+KY L+ H
Sbjct: 301 DPIEKIADVCQKYKLWLH 318


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 111 LEVAFCASVCKGSTFDIRQTHLLFFREFATK 203
           LE+    +VC+ +  + ++T  L +R   TK
Sbjct: 291 LEILITVTVCELTILEYKRTKKLLYRIPVTK 321


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 111 LEVAFCASVCKGSTFDIRQTHLLFFREFATK 203
           LE+    +VC+ +  + ++T  L +R   TK
Sbjct: 116 LEILITVTVCELTILEYKRTKKLLYRIPVTK 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,441
Number of Sequences: 336
Number of extensions: 2667
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)