Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0039
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY207005-1|AAO52739.1| 175|Homo sapiens ferritin-like protein p... 36 0.13
BX571748-1|CAE11873.1| 241|Homo sapiens hypothetical protein pr... 35 0.22
X03742-1|CAA27382.1| 83|Homo sapiens L apoferritin protein. 35 0.29
M11147-1|AAA52439.1| 175|Homo sapiens FTL protein. 35 0.29
M10119-1|AAA35831.1| 175|Homo sapiens protein ( Human ferritin ... 35 0.29
CR456715-1|CAG32996.1| 175|Homo sapiens FTL protein. 35 0.29
BC067772-1|AAH67772.1| 107|Homo sapiens FTL protein protein. 35 0.29
BC062708-1|AAH62708.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC058820-1|AAH58820.1| 175|Homo sapiens FTL protein protein. 35 0.29
BC021670-1|AAH21670.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC018990-1|AAH18990.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC016715-1|AAH16715.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC016354-1|AAH16354.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC016346-1|AAH16346.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC013928-1|AAH13928.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC008439-1|AAH08439.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC004245-1|AAH04245.1| 175|Homo sapiens ferritin, light polypep... 35 0.29
BC002991-1|AAH02991.2| 175|Homo sapiens ferritin, light polypep... 35 0.29
AY466472-1|AAS45711.1| 191|Homo sapiens ferritin light polypept... 35 0.29
DQ094831-1|AAZ04400.1| 83|Homo sapiens ferritin light chain pr... 33 0.67
DQ094830-1|AAZ04399.1| 83|Homo sapiens ferritin light chain pr... 33 0.67
BC100770-1|AAI00771.1| 183|Homo sapiens ferritin, heavy polypep... 33 0.88
BC100769-1|AAI00770.1| 183|Homo sapiens ferritin, heavy polypep... 33 0.88
BC100768-1|AAI00769.1| 183|Homo sapiens ferritin, heavy polypep... 33 0.88
BC069538-1|AAH69538.2| 183|Homo sapiens ferritin, heavy polypep... 33 0.88
BC069069-1|AAH69069.2| 183|Homo sapiens ferritin, heavy polypep... 33 0.88
AF285592-1|AAK31971.1| 183|Homo sapiens ferritin heavy polypept... 33 0.88
X55504-1|CAA39119.1| 855|Homo sapiens P120 antigen protein. 33 1.2
M32110-1|AAA36398.1| 869|Homo sapiens protein ( Human prolifera... 33 1.2
BC128184-1|AAI28185.1| 812|Homo sapiens NOL1 protein protein. 33 1.2
BC128183-1|AAI28184.1| 812|Homo sapiens NOL1 protein protein. 33 1.2
BC106072-1|AAI06073.1| 845|Homo sapiens NOL1 protein protein. 33 1.2
BC082985-1|AAH82985.1| 628|Homo sapiens NOL1 protein protein. 33 1.2
BC065257-1|AAH65257.1| 808|Homo sapiens nucleolar protein 1, 12... 33 1.2
BC000656-1|AAH00656.1| 812|Homo sapiens NOL1 protein protein. 33 1.2
AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransfera... 32 1.5
>AY207005-1|AAO52739.1| 175|Homo sapiens ferritin-like protein
protein.
Length = 175
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 389 ALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L +LYL+ SY YL YF+ EG + LFR+L++++
Sbjct: 19 SLVNLYLQASYTYLSLGFYFDRDDVALEGVSHLFRELAEEK 59
>BX571748-1|CAE11873.1| 241|Homo sapiens hypothetical protein
protein.
Length = 241
Score = 35.1 bits (77), Expect = 0.22
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 PHCS-AYYGQFKDNHVVANE--LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRK 496
P C Q + N+ E + +L +LYL+ SY YL YF+ EG + FR+
Sbjct: 61 PSCQPTMSSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRE 120
Query: 497 LSDDR 511
L++++
Sbjct: 121 LAEEK 125
>X03742-1|CAA27382.1| 83|Homo sapiens L apoferritin protein.
Length = 83
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>M11147-1|AAA52439.1| 175|Homo sapiens FTL protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>M10119-1|AAA35831.1| 175|Homo sapiens protein ( Human ferritin
light subunit mRNA, complete cds. ).
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>CR456715-1|CAG32996.1| 175|Homo sapiens FTL protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 350 QFKDNHVVANELKA--LASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
Q + N+ E A L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 4 QIRQNYSTDVEAAANSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC067772-1|AAH67772.1| 107|Homo sapiens FTL protein protein.
Length = 107
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC062708-1|AAH62708.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC058820-1|AAH58820.1| 175|Homo sapiens FTL protein protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC021670-1|AAH21670.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC018990-1|AAH18990.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC016715-1|AAH16715.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC016354-1|AAH16354.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC016346-1|AAH16346.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC013928-1|AAH13928.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC008439-1|AAH08439.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC004245-1|AAH04245.1| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>BC002991-1|AAH02991.2| 175|Homo sapiens ferritin, light
polypeptide protein.
Length = 175
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>AY466472-1|AAS45711.1| 191|Homo sapiens ferritin light polypeptide
variant protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L++++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEK 59
>DQ094831-1|AAZ04400.1| 83|Homo sapiens ferritin light chain
protein.
Length = 83
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L+ ++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAKEK 59
>DQ094830-1|AAZ04399.1| 83|Homo sapiens ferritin light chain
protein.
Length = 83
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 383 LKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+ +L +LYL+ SY YL YF+ EG + FR+L+ ++
Sbjct: 17 VNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAKEK 59
>BC100770-1|AAI00771.1| 183|Homo sapiens ferritin, heavy
polypeptide-like 17 protein.
Length = 183
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 398 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L L SY YL A YFN E F + F +LSDD+
Sbjct: 26 TLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDK 63
>BC100769-1|AAI00770.1| 183|Homo sapiens ferritin, heavy
polypeptide-like 17 protein.
Length = 183
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 398 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L L SY YL A YFN E F + F +LSDD+
Sbjct: 26 TLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDK 63
>BC100768-1|AAI00769.1| 183|Homo sapiens ferritin, heavy
polypeptide-like 17 protein.
Length = 183
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 398 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L L SY YL A YFN E F + F +LSDD+
Sbjct: 26 TLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDK 63
>BC069538-1|AAH69538.2| 183|Homo sapiens ferritin, heavy
polypeptide-like 17 protein.
Length = 183
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 398 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L L SY YL A YFN E F + F +LSDD+
Sbjct: 26 TLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDK 63
>BC069069-1|AAH69069.2| 183|Homo sapiens ferritin, heavy
polypeptide-like 17 protein.
Length = 183
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 398 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L L SY YL A YFN E F + F +LSDD+
Sbjct: 26 TLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDK 63
>AF285592-1|AAK31971.1| 183|Homo sapiens ferritin heavy
polypeptide-like 17 protein.
Length = 183
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 398 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDR 511
+L L SY YL A YFN E F + F +LSDD+
Sbjct: 26 TLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDK 63
>X55504-1|CAA39119.1| 855|Homo sapiens P120 antigen protein.
Length = 855
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 191 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 248
>M32110-1|AAA36398.1| 869|Homo sapiens protein ( Human
proliferating-cell nucleolar protein P120 mRNA, complete
cds. ).
Length = 869
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 205 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 262
>BC128184-1|AAI28185.1| 812|Homo sapiens NOL1 protein protein.
Length = 812
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 191 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 248
>BC128183-1|AAI28184.1| 812|Homo sapiens NOL1 protein protein.
Length = 812
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 191 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 248
>BC106072-1|AAI06073.1| 845|Homo sapiens NOL1 protein protein.
Length = 845
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 224 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 281
>BC082985-1|AAH82985.1| 628|Homo sapiens NOL1 protein protein.
Length = 628
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 187 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 244
>BC065257-1|AAH65257.1| 808|Homo sapiens nucleolar protein 1,
120kDa protein.
Length = 808
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 187 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 244
>BC000656-1|AAH00656.1| 812|Homo sapiens NOL1 protein protein.
Length = 812
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 QRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQ--QLPDEQGRIREALQEIIG 504
++ + P G P+ E G+ + V E L P G + Q Q PD Q R+ + +Q+I+G
Sbjct: 191 EKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQ-RVHKRIQDIVG 248
>AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransferase
type I beta subunit protein.
Length = 300
Score = 32.3 bits (70), Expect = 1.5
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +2
Query: 242 CLSGLGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSY 421
CL+GL L ED + V +G + +C++ +N + KA+ Y++RS
Sbjct: 147 CLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAIT--YIRRS- 203
Query: 422 HYLLSASYFNNYQTNR 469
LL + N++ NR
Sbjct: 204 -MLLKIFQYTNFEKNR 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,273,752
Number of Sequences: 237096
Number of extensions: 1692847
Number of successful extensions: 3257
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3257
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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