Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0039
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 23 2.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 3.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.9
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 433 VGLLLQQLPDEQGRIREALQEIIGRSWEKTIGLIKHVTK 549
+GL L + L+ +G+ W+K + L VTK
Sbjct: 68 IGLFLHEELRRTEAFEVDLEFYLGKEWKKNLNLRDSVTK 106
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 274 RLMLSERRPRMQTDFKSAAL 333
RL +RR RM+ D+K AL
Sbjct: 407 RLAEQDRRERMEFDWKQVAL 426
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 410 KRSYHYLLSASYFNNYQTNREGFAKLF 490
++S + + +S NNY N + KL+
Sbjct: 74 EKSKEHKIISSLSNNYNYNNNNYKKLY 100
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 410 KRSYHYLLSASYFNNYQTNREGFAKLF 490
++S + + +S NNY N + KL+
Sbjct: 74 EKSKEHKIISSLSNNYNYNNNNYKKLY 100
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 410 KRSYHYLLSASYFNNYQTNREGFAKLF 490
++S + + +S NNY N + KL+
Sbjct: 74 EKSKEHKIISSLSNNYNYNNNNYKKLY 100
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 407 LKRSYHYLLSASYFNNYQTN 466
L +Y Y +Y NNY TN
Sbjct: 85 LSNNYKYSNYNNYNNNYNTN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,013
Number of Sequences: 438
Number of extensions: 3270
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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