Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0031
(661 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 124 8e-31
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 44 1e-06
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 43 3e-06
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 43 3e-06
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.85
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.0
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 124 bits (299), Expect = 8e-31
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +1
Query: 256 FDLEYSLGHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDP 435
F+L+Y LG KI F C+A G PRP ITW KDG+E++ H + +HEWP+G D +KSK+EIDP
Sbjct: 30 FELDYMLGRKITFFCMATGFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDP 89
Query: 436 ATQMDAGVYECTADNMYSI 492
ATQ DAG YEC ADN Y++
Sbjct: 90 ATQKDAGYYECQADNQYAV 108
Score = 33.1 bits (72), Expect = 0.002
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 170 LPITGKYRDPESDQYYNNNDGAKILLAS 253
+PI +R+P S YY N DGA+I+ AS
Sbjct: 1 MPILIPHRNPASANYYENKDGARIVKAS 28
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 44.0 bits (99), Expect = 1e-06
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 277 GHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAG 456
G + C+A GNP P ITW DG + L + ++ V S + I D G
Sbjct: 408 GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSTHTNDGG 467
Query: 457 VYECTA 474
+Y+C A
Sbjct: 468 LYKCIA 473
Score = 31.9 bits (69), Expect = 0.006
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 253 TFDLEYSLGHK--IAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIE 426
+FD +++ +K + C+A G P P +TW G + + + + P G +K E
Sbjct: 1281 SFDDKFTATYKEDVKLPCLAVGVPAPEVTWKVRGAVLQSSD--RLRQLPEGSLFIK---E 1335
Query: 427 IDPATQMDAGVYECTADNMY 486
+D + DAG Y C +N +
Sbjct: 1336 VD---RTDAGEYSCYVENTF 1352
Score = 29.5 bits (63), Expect = 0.030
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 277 GHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAG 456
G F C +GNP ++W KDG P+G + ++ + I+ + D G
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGK-------------PLGLE--EAVLRIESVKKEDKG 366
Query: 457 VYECTADN 480
+Y+C N
Sbjct: 367 MYQCFVRN 374
Score = 27.5 bits (58), Expect = 0.12
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 262 LEYSLGHKIAFLCIAKGNPRPHITWFK-DG 348
+++S G C A+GNP+P I W + DG
Sbjct: 13 VDFSNGTGAVVECQARGNPQPDIIWVRADG 42
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 259 DLEYSLGHKIAFLCIAKGNPRPHITWFK 342
D ++ G C A G P+P +TW K
Sbjct: 687 DKAFAQGSDARVECKADGFPKPQVTWKK 714
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 403 DRVKSKIEIDPATQMDAGVYECTADN 480
DRV S + I T AG Y CTA+N
Sbjct: 638 DRV-SMLMISVITARHAGEYVCTAEN 662
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 286 IAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAGVYE 465
+ LC A+G P P W+K + ++E +V + I A D+G Y
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE---RVRQVSGTLIIREARVEDSGKYL 286
Query: 466 CTADN 480
C +N
Sbjct: 287 CIVNN 291
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 42.7 bits (96), Expect = 3e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 277 GHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAG 456
G ++ C A GNP P +TW DG + + I ++ V S + I D G
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGG 495
Query: 457 VYECTADN 480
Y C A+N
Sbjct: 496 EYSCMAEN 503
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 298 CIAKGNPRPHITWFKDG-VEIF-AHHYLHIHEWPIGEDRVKSKIEIDPATQMDAGVYECT 471
C G+ +TW K G +E+ + +Y + + D V ++++I A D+G Y C
Sbjct: 829 CEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQ 888
Query: 472 ADNMY 486
A N+Y
Sbjct: 889 ASNLY 893
Score = 27.5 bits (58), Expect = 0.12
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 262 LEYSLGHKIAFLCIAKGNPR--PH-ITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEID 432
L LG F C +P+ PH ITW+KDG ++ P G R + ++
Sbjct: 340 LSVHLGGNAEFRCEVSTHPQAGPHFITWYKDGRQL-----------P-GTGRQSELLRLN 387
Query: 433 PATQMDAGVYEC 468
+ D G+Y+C
Sbjct: 388 GINREDRGMYQC 399
Score = 26.2 bits (55), Expect = 0.28
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +1
Query: 253 TFDLEYSLGHKIAFLC-IAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGE-DRVKSKIE 426
TF S G + +C +A G+P I+W KDG F ++ I + D S +
Sbjct: 617 TFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDGQSPFPLP-PNLASANISQLDPYSSLLS 675
Query: 427 IDPATQMDAGVYECTADN 480
I +G Y C A N
Sbjct: 676 ITNLAAEHSGDYTCVAAN 693
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +1
Query: 289 AFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAGVYEC 468
+ +C+A+ P P W+ + + P + S + ++ T D G+Y C
Sbjct: 256 SLVCVAQACPTPEYRWYAQT----GSEPMLVLSGPRTR-LLGSVLALEAVTLEDNGIYRC 310
Query: 469 TADN 480
+A N
Sbjct: 311 SASN 314
Score = 23.8 bits (49), Expect = 1.5
Identities = 17/74 (22%), Positives = 26/74 (35%)
Frame = +1
Query: 259 DLEYSLGHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPA 438
D+ +A C A+G P P I W K + Y + E + + +
Sbjct: 718 DVSVERNKHVALHCQAQGVPTPTIVW-KKATGSKSGEYEELRERAYTKILSNGTLLLQHV 776
Query: 439 TQMDAGVYECTADN 480
+ G Y C A N
Sbjct: 777 KEDREGFYLCQASN 790
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 448 DAGVYECTADN 480
DAGVY C+A N
Sbjct: 583 DAGVYTCSARN 593
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 42.7 bits (96), Expect = 3e-06
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 277 GHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAG 456
G ++ C A GNP P +TW DG + + I ++ V S + I D G
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVEDGG 495
Query: 457 VYECTADN 480
Y C A+N
Sbjct: 496 EYSCMAEN 503
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 298 CIAKGNPRPHITWFKDG-VEIF-AHHYLHIHEWPIGEDRVKSKIEIDPATQMDAGVYECT 471
C G+ +TW K G +E+ + +Y + + D V ++++I A D+G Y C
Sbjct: 825 CEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAYFCQ 884
Query: 472 ADNMY 486
A N+Y
Sbjct: 885 ASNLY 889
Score = 27.5 bits (58), Expect = 0.12
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 262 LEYSLGHKIAFLCIAKGNPR--PH-ITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEID 432
L LG F C +P+ PH ITW+KDG ++ P G R + ++
Sbjct: 340 LSVHLGGNAEFRCEVSTHPQAGPHFITWYKDGRQL-----------P-GTGRQSELLRLN 387
Query: 433 PATQMDAGVYEC 468
+ D G+Y+C
Sbjct: 388 GINREDRGMYQC 399
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +1
Query: 289 AFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAGVYEC 468
+ +C+A+ P P W+ + + P + S + ++ T D G+Y C
Sbjct: 256 SLVCVAQACPTPEYRWYAQT----GSEPMLVLSGPRTR-LLGSVLALEAVTLEDNGIYRC 310
Query: 469 TADN 480
+A N
Sbjct: 311 SASN 314
Score = 23.8 bits (49), Expect = 1.5
Identities = 17/74 (22%), Positives = 26/74 (35%)
Frame = +1
Query: 259 DLEYSLGHKIAFLCIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPA 438
D+ +A C A+G P P I W K + Y + E + + +
Sbjct: 714 DVSVERNKHVALHCQAQGVPTPTIVW-KKATGSKSGEYEELRERAYTKILSNGTLLLQHV 772
Query: 439 TQMDAGVYECTADN 480
+ G Y C A N
Sbjct: 773 KEDREGFYLCQASN 786
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 448 DAGVYECTADN 480
DAGVY C+A N
Sbjct: 583 DAGVYTCSARN 593
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 24.6 bits (51), Expect = 0.85
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +1
Query: 298 CIAKGNPRPHITWFKDGVEIFAHHYLHIHEWPIGEDRVKSKIEIDPATQMDAGVYECTAD 477
C G P P + W K+ E H ++ IG +K+ I D G Y C A
Sbjct: 423 CHVAGEPLPRVQWLKND-EALNHDQPDKYDL-IGNG---TKLIIKNVDYADTGAYMCQAS 477
Query: 478 NMYSI 492
++ I
Sbjct: 478 SIGGI 482
Score = 24.2 bits (50), Expect = 1.1
Identities = 7/28 (25%), Positives = 14/28 (50%)
Frame = +1
Query: 274 LGHKIAFLCIAKGNPRPHITWFKDGVEI 357
+G + C G P P + W ++G ++
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVWRRNGADL 351
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 122 RRGRPRSRTKSKVQIGLPITGKYRDPESDQYYNNNDGAKI 241
RR R RS+ + K+ L + Y S+ YYNNN+ K+
Sbjct: 292 RRERERSK-EPKIISSLSNSCNY----SNNYYNNNNYKKL 326
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 195 SRYLPVIGNPICTFDLVLLLGRP 127
S+ LP++ NP T +LV + P
Sbjct: 306 SKPLPMVDNPESTGNLVYIYNNP 328
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,990
Number of Sequences: 438
Number of extensions: 4093
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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