Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0024
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        25   1.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.8  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   4.8  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.3  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 355 GSGDSGPAQHRAFNGSGLEGTYKRSHRRAXNRAG 456
           G G  G  +HR      ++GT K + RR   R G
Sbjct: 10  GLGKGGARRHRKVLRDNIQGTTKPAIRRLARRGG 43


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 253 IATSSSGKLELIRRAAARRTPQSSRAVALDSLIIFSTSVSVASAI 119
           + T+SS K+EL+R A       S   + +D  I      + ++AI
Sbjct: 689 VVTTSSQKIELVREAFEAFGRVSGARLNVDKTIALDVGYTTSNAI 733


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 566 LGRPQDRS-TRALAPNVSSTCPPARARGPD 480
           + R + RS T+  +  V ST  P+R+ GPD
Sbjct: 350 MSRGRSRSQTKRYSQTVESTNAPSRSPGPD 379


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 392 KARCCAGPESPXPDLGDSLLHPHHSGTGLRKL 297
           + +C A  +SP    G+  LHP   G+ L+ +
Sbjct: 19  RTKCAACLDSPDGMNGNESLHPRPLGSALKDI 50


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 586  TTLQFLFWVGLR 551
            TT Q +FW+GLR
Sbjct: 1812 TTCQTVFWIGLR 1823


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 586  TTLQFLFWVGLR 551
            TT Q +FW+GLR
Sbjct: 1813 TTCQTVFWIGLR 1824


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,977
Number of Sequences: 2352
Number of extensions: 13617
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)