BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0024
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023929-1|ABB36433.1| 352|Drosophila melanogaster RE60807p pro... 44 2e-04
AL023874-4|CAA19648.1| 352|Drosophila melanogaster EG:100G10.3 ... 44 2e-04
AJ344147-1|CAC82992.1| 352|Drosophila melanogaster eIF2B-beta p... 44 2e-04
AF289101-1|AAG38015.1| 352|Drosophila melanogaster eukaryotic i... 44 2e-04
AE014298-446|AAF45809.1| 352|Drosophila melanogaster CG2677-PA ... 44 2e-04
U36791-1|AAC46927.1| 601|Drosophila melanogaster DHR78 protein. 30 2.4
AY058317-1|AAL13546.1| 599|Drosophila melanogaster GH08073p pro... 30 2.4
AE014296-3548|AAS65089.1| 601|Drosophila melanogaster CG7199-PD... 30 2.4
AE014296-3547|AAN12169.1| 601|Drosophila melanogaster CG7199-PC... 30 2.4
AE014296-3546|AAN12168.1| 601|Drosophila melanogaster CG7199-PB... 30 2.4
AE014296-3545|AAF51731.1| 599|Drosophila melanogaster CG7199-PA... 30 2.4
AY095201-1|AAM12294.1| 428|Drosophila melanogaster RE34120p pro... 29 5.5
AF096272-1|AAC72375.1| 428|Drosophila melanogaster Sam50 protein. 29 5.5
AE013599-2476|AAM70877.1| 394|Drosophila melanogaster CG4816-PC... 29 5.5
AE013599-2475|AAM70876.1| 428|Drosophila melanogaster CG4816-PB... 29 5.5
AE013599-2474|AAF57857.1| 428|Drosophila melanogaster CG4816-PA... 29 5.5
X52844-1|CAA37036.1| 803|Drosophila melanogaster protein ( Dros... 29 7.2
U18298-1|AAA57340.1| 875|Drosophila melanogaster CDC27Dm protein. 29 7.2
BT021947-1|AAX51652.1| 900|Drosophila melanogaster LD12661p pro... 29 7.2
AE014296-1216|AAF50592.1| 900|Drosophila melanogaster CG8610-PA... 29 7.2
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA... 29 7.2
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro... 28 9.6
AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p pro... 28 9.6
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,... 28 9.6
AE014297-918|AAF54366.1| 804|Drosophila melanogaster CG8874-PB,... 28 9.6
AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-P... 28 9.6
AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-P... 28 9.6
>BT023929-1|ABB36433.1| 352|Drosophila melanogaster RE60807p
protein.
Length = 352
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 SDHMIRRVLRAIRDEN---RASVDQFQSGEGVGESLQGLXLATPARH-SIVPSTDQD-LR 412
+ ++ RR+L+ R+E A V F SL L T + S+ S Q LR
Sbjct: 71 TSNIARRILKLTREEFDLLHAKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLR 130
Query: 413 EPIRDHIAELRTELETMRXSITSQAREHVRA 505
E + DH+ E+ TELET +I QA EH+ +
Sbjct: 131 EALLDHLQEVETELETSSENICVQAEEHIHS 161
>AL023874-4|CAA19648.1| 352|Drosophila melanogaster EG:100G10.3
protein.
Length = 352
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 SDHMIRRVLRAIRDEN---RASVDQFQSGEGVGESLQGLXLATPARH-SIVPSTDQD-LR 412
+ ++ RR+L+ R+E A V F SL L T + S+ S Q LR
Sbjct: 71 TSNIARRILKLTREEFDLLHAKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLR 130
Query: 413 EPIRDHIAELRTELETMRXSITSQAREHVRA 505
E + DH+ E+ TELET +I QA EH+ +
Sbjct: 131 EALLDHLQEVETELETSSENICVQAEEHIHS 161
>AJ344147-1|CAC82992.1| 352|Drosophila melanogaster eIF2B-beta
protein protein.
Length = 352
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 SDHMIRRVLRAIRDEN---RASVDQFQSGEGVGESLQGLXLATPARH-SIVPSTDQD-LR 412
+ ++ RR+L+ R+E A V F SL L T + S+ S Q LR
Sbjct: 71 TSNIARRILKLTREEFDLLHAKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLR 130
Query: 413 EPIRDHIAELRTELETMRXSITSQAREHVRA 505
E + DH+ E+ TELET +I QA EH+ +
Sbjct: 131 EALLDHLQEVETELETSSENICVQAEEHIHS 161
>AF289101-1|AAG38015.1| 352|Drosophila melanogaster eukaryotic
initiation factor eIF2Bbeta subunit protein.
Length = 352
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 SDHMIRRVLRAIRDEN---RASVDQFQSGEGVGESLQGLXLATPARH-SIVPSTDQD-LR 412
+ ++ RR+L+ R+E A V F SL L T + S+ S Q LR
Sbjct: 71 TSNIARRILKLTREEFDLLHAKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLR 130
Query: 413 EPIRDHIAELRTELETMRXSITSQAREHVRA 505
E + DH+ E+ TELET +I QA EH+ +
Sbjct: 131 EALLDHLQEVETELETSSENICVQAEEHIHS 161
>AE014298-446|AAF45809.1| 352|Drosophila melanogaster CG2677-PA
protein.
Length = 352
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 248 SDHMIRRVLRAIRDEN---RASVDQFQSGEGVGESLQGLXLATPARH-SIVPSTDQD-LR 412
+ ++ RR+L+ R+E A V F SL L T + S+ S Q LR
Sbjct: 71 TSNIARRILKLTREEFDLLHAKVQHFADDSQASLSLHKLVTQTSESNVSVDYSVPQHGLR 130
Query: 413 EPIRDHIAELRTELETMRXSITSQAREHVRA 505
E + DH+ E+ TELET +I QA EH+ +
Sbjct: 131 EALLDHLQEVETELETSSENICVQAEEHIHS 161
>U36791-1|AAC46927.1| 601|Drosophila melanogaster DHR78 protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 314 FQSGEGVGESLQGLXLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRXSITSQ 484
+Q G G G S++ ATP HS P+T +L E P+ + AEL L Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220
Query: 485 AREHVRADRCYSRSGPALWSSGPEADPE 568
++H ++ YS P + P+ADPE
Sbjct: 221 QQQHQQSG-SYS---PDI----PKADPE 240
>AY058317-1|AAL13546.1| 599|Drosophila melanogaster GH08073p
protein.
Length = 599
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 314 FQSGEGVGESLQGLXLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRXSITSQ 484
+Q G G G S++ ATP HS P+T +L E P+ + AEL L Q
Sbjct: 160 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 218
Query: 485 AREHVRADRCYSRSGPALWSSGPEADPE 568
++H ++ YS P + P+ADPE
Sbjct: 219 QQQHQQSG-SYS---PDI----PKADPE 238
>AE014296-3548|AAS65089.1| 601|Drosophila melanogaster CG7199-PD,
isoform D protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 314 FQSGEGVGESLQGLXLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRXSITSQ 484
+Q G G G S++ ATP HS P+T +L E P+ + AEL L Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220
Query: 485 AREHVRADRCYSRSGPALWSSGPEADPE 568
++H ++ YS P + P+ADPE
Sbjct: 221 QQQHQQSG-SYS---PDI----PKADPE 240
>AE014296-3547|AAN12169.1| 601|Drosophila melanogaster CG7199-PC,
isoform C protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 314 FQSGEGVGESLQGLXLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRXSITSQ 484
+Q G G G S++ ATP HS P+T +L E P+ + AEL L Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220
Query: 485 AREHVRADRCYSRSGPALWSSGPEADPE 568
++H ++ YS P + P+ADPE
Sbjct: 221 QQQHQQSG-SYS---PDI----PKADPE 240
>AE014296-3546|AAN12168.1| 601|Drosophila melanogaster CG7199-PB,
isoform B protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 314 FQSGEGVGESLQGLXLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRXSITSQ 484
+Q G G G S++ ATP HS P+T +L E P+ + AEL L Q
Sbjct: 162 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 220
Query: 485 AREHVRADRCYSRSGPALWSSGPEADPE 568
++H ++ YS P + P+ADPE
Sbjct: 221 QQQHQQSG-SYS---PDI----PKADPE 240
>AE014296-3545|AAF51731.1| 599|Drosophila melanogaster CG7199-PA,
isoform A protein.
Length = 599
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 314 FQSGEGVGESLQGLXLATPARHSIVPSTDQDLRE---PIRDHIAELRTELETMRXSITSQ 484
+Q G G G S++ ATP HS P+T +L E P+ + AEL L Q
Sbjct: 160 YQQGRGKGHSVKAESAATPPVHS-APATAFNLNENIFPMGLNFAELTQTLMFATQQQQQQ 218
Query: 485 AREHVRADRCYSRSGPALWSSGPEADPE 568
++H ++ YS P + P+ADPE
Sbjct: 219 QQQHQQSG-SYS---PDI----PKADPE 238
>AY095201-1|AAM12294.1| 428|Drosophila melanogaster RE34120p
protein.
Length = 428
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 GSGDSGPAQHRAFNGSGLEGTYKRSH 432
G G G +Q A GSGL + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425
>AF096272-1|AAC72375.1| 428|Drosophila melanogaster Sam50 protein.
Length = 428
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 GSGDSGPAQHRAFNGSGLEGTYKRSH 432
G G G +Q A GSGL + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425
>AE013599-2476|AAM70877.1| 394|Drosophila melanogaster CG4816-PC,
isoform C protein.
Length = 394
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 GSGDSGPAQHRAFNGSGLEGTYKRSH 432
G G G +Q A GSGL + RSH
Sbjct: 366 GLGTGGASQSNAIGGSGLSSNHNRSH 391
>AE013599-2475|AAM70876.1| 428|Drosophila melanogaster CG4816-PB,
isoform B protein.
Length = 428
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 GSGDSGPAQHRAFNGSGLEGTYKRSH 432
G G G +Q A GSGL + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425
>AE013599-2474|AAF57857.1| 428|Drosophila melanogaster CG4816-PA,
isoform A protein.
Length = 428
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 GSGDSGPAQHRAFNGSGLEGTYKRSH 432
G G G +Q A GSGL + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425
>X52844-1|CAA37036.1| 803|Drosophila melanogaster protein (
Drosophila melanogasterdfps 85D mRNA. ).
Length = 803
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 434 AELRTELETMRXSITSQAREHVRADRCYSRSGPALWSSGPEADPE*ELQGRRRGRDWTS 610
AELR +ETM+ SI +A+ D+ Y+ S A+ G + D E+QG + W S
Sbjct: 22 AELRL-METMKRSIQMKAK----CDKEYAISLTAVAQQGLKTDRADEMQGSLISKSWRS 75
>U18298-1|AAA57340.1| 875|Drosophila melanogaster CDC27Dm protein.
Length = 875
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 21 LESXDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVL 200
+E LSEK E V + NN SG AE L+ ++ + A +L G+
Sbjct: 474 IEDKSHHLSEKRKEKVETITSSGANNN-SGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLK 532
Query: 201 RAAA 212
+ +A
Sbjct: 533 KQSA 536
>BT021947-1|AAX51652.1| 900|Drosophila melanogaster LD12661p
protein.
Length = 900
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 21 LESXDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVL 200
+E LSEK E V + NN SG AE L+ ++ + A +L G+
Sbjct: 474 IEDKSHHLSEKRKEKVETITSSGANNN-SGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLK 532
Query: 201 RAAA 212
+ +A
Sbjct: 533 KQSA 536
>AE014296-1216|AAF50592.1| 900|Drosophila melanogaster CG8610-PA
protein.
Length = 900
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 21 LESXDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVL 200
+E LSEK E V + NN SG AE L+ ++ + A +L G+
Sbjct: 474 IEDKSHHLSEKRKEKVETITSSGANNN-SGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLK 532
Query: 201 RAAA 212
+ +A
Sbjct: 533 KQSA 536
>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
protein.
Length = 1218
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 374 GPESPXPDLGDSLLHPHHSGTG 309
GP P P G HPHH G G
Sbjct: 444 GPGGPGPPHGGHPHHPHHGGAG 465
>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
protein.
Length = 1325
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 434 AELRTELETMRXSITSQAREHVRADRCYSRSGPALWSSGPEADPE*ELQGRRRGRDWTS 610
AELR +ETM+ SI +A+ D+ Y+ S A+ G + D E+QG + W S
Sbjct: 22 AELRL-METMKRSIQMKAK----CDKEYAISLTAVAQQGLKIDRADEMQGSLISKSWRS 75
>AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p
protein.
Length = 594
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 SPRSGSG-DSGPAQHRAFNGSGLEGTYKRSHRRAXNRAGDNE 465
SP G G D A++ NGSG ++K+ +R+ +R+G +
Sbjct: 36 SPGGGGGHDDDYAENGPRNGSGGGSSHKKQSKRSRSRSGSRD 77
>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
isoform A protein.
Length = 1325
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 434 AELRTELETMRXSITSQAREHVRADRCYSRSGPALWSSGPEADPE*ELQGRRRGRDWTS 610
AELR +ETM+ SI +A+ D+ Y+ S A+ G + D E+QG + W S
Sbjct: 22 AELRL-METMKRSIQMKAK----CDKEYAISLTAVAQQGLKIDRADEMQGSLISKSWRS 75
>AE014297-918|AAF54366.1| 804|Drosophila melanogaster CG8874-PB,
isoform B protein.
Length = 804
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 434 AELRTELETMRXSITSQAREHVRADRCYSRSGPALWSSGPEADPE*ELQGRRRGRDWTS 610
AELR +ETM+ SI +A+ D+ Y+ S A+ G + D E+QG + W S
Sbjct: 22 AELRL-METMKRSIQMKAK----CDKEYAISLTAVAQQGLKIDRADEMQGSLISKSWRS 75
>AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-PB,
isoform B protein.
Length = 594
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 SPRSGSG-DSGPAQHRAFNGSGLEGTYKRSHRRAXNRAGDNE 465
SP G G D A++ NGSG ++K+ +R+ +R+G +
Sbjct: 36 SPGGGGGHDDDYAENGPRNGSGGGSSHKKQSKRSRSRSGSRD 77
>AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-PA,
isoform A protein.
Length = 594
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 343 SPRSGSG-DSGPAQHRAFNGSGLEGTYKRSHRRAXNRAGDNE 465
SP G G D A++ NGSG ++K+ +R+ +R+G +
Sbjct: 36 SPGGGGGHDDDYAENGPRNGSGGGSSHKKQSKRSRSRSGSRD 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,005,496
Number of Sequences: 53049
Number of extensions: 689200
Number of successful extensions: 2131
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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