Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0023
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    27   0.70 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.8  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   6.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 464 NIRLRCKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNM 345
           N + +C+ +    L  Y+K L+  +EE A   +EV+KT M
Sbjct: 279 NDKSKCESADASPLNSYVKTLINHIEEAA---LEVYKTKM 315


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 110 IYQSCPHPGRNWLLSSQG*TILXLKKKTAYNNT 12
           I +    PG N +++S+G T+       AY NT
Sbjct: 141 IIEDSASPGVNKIVNSRGNTLCAASSPNAYTNT 173


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 426 VQCVGFLAPKAYVSTSLWFRTMSTPLSTPSPCPRQPLQP 542
           V   G +A    VST +   T + PLS  SP  R  +QP
Sbjct: 8   VTLFGAIALLLLVSTEM---TFANPLSPNSPAERPHIQP 43


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 483 RTMSTPLSTPSPCPRQPLQPKD*NPRSGYHP 575
           R   +P  +PSP  +Q L P + +    Y P
Sbjct: 442 RPGQSPTQSPSPGSQQSLSPANTDENFSYRP 472


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,067
Number of Sequences: 2352
Number of extensions: 13333
Number of successful extensions: 71
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)