Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0011
(666 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VY28 Cluster: Probable mitochondrial 28S ribosomal pr... 111 2e-23
UniRef50_UPI00005851D0 Cluster: PREDICTED: similar to ENSANGP000... 93 4e-18
UniRef50_P82663 Cluster: Mitochondrial 28S ribosomal protein S25... 85 1e-15
UniRef50_Q9N361 Cluster: Probable mitochondrial 28S ribosomal pr... 68 2e-10
UniRef50_Q5DDM5 Cluster: SJCHGC02544 protein; n=1; Schistosoma j... 63 5e-09
UniRef50_A7S159 Cluster: Predicted protein; n=1; Nematostella ve... 56 8e-07
UniRef50_A7SU42 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_O94914 Cluster: KIAA0825 protein; n=31; Amniota|Rep: KI... 33 6.2
UniRef50_Q2BF37 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_A0D185 Cluster: Chromosome undetermined scaffold_34, wh... 33 8.2
>UniRef50_Q9VY28 Cluster: Probable mitochondrial 28S ribosomal
protein S25; n=3; Endopterygota|Rep: Probable
mitochondrial 28S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 167
Score = 111 bits (266), Expect = 2e-23
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +3
Query: 255 IVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXX 434
++TLKN+TPSPF++CY DDGR +LID+D++++ DI++HL+ VGK+
Sbjct: 65 VLTLKNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESK 124
Query: 435 DNPANFGVGCDRSCMCEVFGQVPC 506
DNPANFG GC R C+CE+ GQVPC
Sbjct: 125 DNPANFGYGCGRHCICEIPGQVPC 148
Score = 104 bits (250), Expect = 2e-21
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 243
MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN G ++ G ++F FW +PQIQ+KN
Sbjct: 1 MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60
Query: 244 PDVQ 255
P+VQ
Sbjct: 61 PEVQ 64
>UniRef50_UPI00005851D0 Cluster: PREDICTED: similar to
ENSANGP00000014061; n=3; Coelomata|Rep: PREDICTED:
similar to ENSANGP00000014061 - Strongylocentrotus
purpuratus
Length = 187
Score = 93.5 bits (222), Expect = 4e-18
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +3
Query: 261 TLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXXDN 440
T KN+TPSPFI+C+L++G+++LIDV++K+K+DI+EHL +GKS N
Sbjct: 66 TFKNITPSPFIRCFLNEGKEVLIDVEDKTKDDIVEHLNKVLGKSERVLATERKAMERSSN 125
Query: 441 PANFGVGCDRSCMCEVFGQVPC 506
PANFG R C+CEV GQ PC
Sbjct: 126 PANFGRTYARWCICEVPGQFPC 147
Score = 79.8 bits (188), Expect = 5e-14
Identities = 33/64 (51%), Positives = 49/64 (76%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 243
MP MKG+ P+RRT+ YL GK+ L+D +K+ S+ YN G+ + G ++F F++LPQ+QYKN
Sbjct: 1 MP-MKGKFPLRRTIRYLEQGKIHLRDSVKILSINYNSFGKESDGARDFVFYHLPQLQYKN 59
Query: 244 PDVQ 255
P+VQ
Sbjct: 60 PNVQ 63
>UniRef50_P82663 Cluster: Mitochondrial 28S ribosomal protein S25;
n=23; Coelomata|Rep: Mitochondrial 28S ribosomal protein
S25 - Homo sapiens (Human)
Length = 173
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +3
Query: 255 IVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXX 434
I+ KN+TPSPF++ YLD G ++L+DV+ KS ++I+EH+ +GK+
Sbjct: 64 IMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEKKQL 123
Query: 435 DNPANFGVG--CDRSCMCEVFGQVPCSVL 515
+PANFG C R C+CEV GQVPC L
Sbjct: 124 SHPANFGPRKYCLRECICEVEGQVPCPSL 152
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 243
MP MKGR PIRRTL YL+ G +V KD +KV +V YN G+ G ++F F+ +PQIQYKN
Sbjct: 1 MP-MKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKN 59
Query: 244 PDVQ 255
P VQ
Sbjct: 60 PWVQ 63
>UniRef50_Q9N361 Cluster: Probable mitochondrial 28S ribosomal
protein S25; n=2; Caenorhabditis|Rep: Probable
mitochondrial 28S ribosomal protein S25 - Caenorhabditis
elegans
Length = 170
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +3
Query: 282 SPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXXDNPANFGVG 461
+PF + YL+DGR++L D+D +E+I + L T+GK+ NPA+FG
Sbjct: 75 TPFARAYLNDGREVLFDLDGMKREEIEKLLAKTLGKTELVERREHLESIAKLNPADFGSK 134
Query: 462 CDRSCMCEVFGQVPCSVL 515
+R CMCEV GQ PC+ L
Sbjct: 135 NERQCMCEVQGQHPCTGL 152
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAY--NITGQNNVGTKEFCFWYLPQIQY 237
MPFM G P+RRT YL GK+ L+D + VFS+ + N T + + G ++F +W Q+QY
Sbjct: 1 MPFMHGSMPLRRTFFYLQQGKVKLRDNVNVFSMGFHKNPTPEQS-GARDFVYWNWAQLQY 59
Query: 238 KNPDVQ 255
NP VQ
Sbjct: 60 HNPKVQ 65
>UniRef50_Q5DDM5 Cluster: SJCHGC02544 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02544 protein - Schistosoma
japonicum (Blood fluke)
Length = 184
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = +3
Query: 255 IVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXX 434
I+T KN+ P+PFIK Y + ++ ++ + DI +HL HT+
Sbjct: 66 IITFKNMFPTPFIKIYFRNEEQV-VNCAFRRNVDIYDHL-HTLLGKPLPSEHSLMNDLTT 123
Query: 435 DNPANFGVGCDRSCMCEVFGQVPCS 509
NP+NFG R C+CEV+GQ+PCS
Sbjct: 124 KNPSNFGTDFPRQCICEVYGQMPCS 148
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 MPFMKG-RAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYK 240
MPF+KG RA + RT YL AG+++L D +K+ +++ + G EF WYLP +Q++
Sbjct: 1 MPFLKGGRAAVTRTKKYLEAGRILLNDGVKIIVISHIPGAAISHGCDEFIKWYLPPMQFR 60
Query: 241 NPDVQ 255
NP++Q
Sbjct: 61 NPNIQ 65
>UniRef50_A7S159 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 166
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXXD 437
+T K+ T P + + DG+K+++DV+NK +ILE G +
Sbjct: 63 ITAKDRTDFPTVDIFYGDGKKVMVDVENKKAPEILEIFSKVAGATESELQIRRQPKYLGR 122
Query: 438 -NPANFGVGCDRSCMCEVFGQVPC 506
NPANFG C+CE+ GQ PC
Sbjct: 123 INPANFGKYGHMYCICEIPGQAPC 146
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 76 KGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKNPDVQ 255
KG+ P RRTL +L+AG++VLK ++ ++Y ++ G + F + LPQIQYKN VQ
Sbjct: 3 KGKFPFRRTLEFLSAGRVVLKKDVRSVMLSYTHKYESK-GLRNFIYKDLPQIQYKNNAVQ 61
>UniRef50_A7SU42 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 139
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 76 KGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQN--NVGTKEFCFWYLPQIQYKNPD 249
+GR + RTL++L + L D + S+ N+ G+ N G K F + +PQ++YKNP
Sbjct: 25 EGRFAVNRTLDHLKRCNVNLPDNVN--SITLNLAGKEKANHGAKRFLYENVPQLKYKNPH 82
Query: 250 VQ 255
VQ
Sbjct: 83 VQ 84
>UniRef50_O94914 Cluster: KIAA0825 protein; n=31; Amniota|Rep:
KIAA0825 protein - Homo sapiens (Human)
Length = 553
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 510 PSRAPARKLHT---CTIYHIQHQNLQGYPFSQPLTIPNLMFLLISLQYVVNVLRYLLSIY 340
PS+AP + LHT +Y QH + P + L+ Q +N L++ ++ Y
Sbjct: 154 PSKAPLKNLHTYLSTAVYVFQHFKRYDNLMKEMTKKPIFLVLVQRYQEFINTLQFQVTNY 213
Query: 339 CLR 331
C+R
Sbjct: 214 CVR 216
>UniRef50_Q2BF37 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 362
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -1
Query: 468 YHIQHQNLQGYPFSQPLTIPNLMFLLISLQYVVNVLRYLLSIYCLRQLKFFFHRQDSI 295
+ I + +L G P + T P ++ + ++N L YLLS L+++ + +H QD +
Sbjct: 124 WEINYDSLAGEPDRKDATFPEYLYD----RNIINDLPYLLSYDALKKIDYQYHNQDKV 177
>UniRef50_A0D185 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1492
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -1
Query: 414 IPNLMFLLISLQYVVNVLRYLLSIYCLRQ--LKFFFHRQDSIL*K-GKALNFLKLLLYVW 244
IP+ +F I+ Q+V+ VL L+ Q + + R + K G+A N L+Y++
Sbjct: 121 IPSQIFCFINQQFVITVLSILVLFLSASQYIISIYIFRNSGFITKNGRAQNITFDLIYIF 180
Query: 243 IF--VLYLR 223
IF +++LR
Sbjct: 181 IFESIIFLR 189
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,928,318
Number of Sequences: 1657284
Number of extensions: 12408089
Number of successful extensions: 27530
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27519
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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