Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0011
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    24   5.0  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    24   5.0  

>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 216 VSTANTIQKSRRTIVTLKNLTPSP 287
           V+  ++I +SR T+V   NLT  P
Sbjct: 99  VTVVSSISRSRSTVVNSYNLTTCP 122


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 216 VSTANTIQKSRRTIVTLKNLTPSP 287
           V+  ++I +SR T+V   NLT  P
Sbjct: 99  VTVVSSISRSRSTVVNSYNLTTCP 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,951
Number of Sequences: 2352
Number of extensions: 13307
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)