Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0011
(666 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029396-1|ABK56982.1| 167|Drosophila melanogaster IP01952p pro... 111 1e-24
BT024442-1|ABC86504.1| 167|Drosophila melanogaster IP01949p pro... 111 1e-24
AE014298-2040|AAF48377.1| 167|Drosophila melanogaster CG14413-P... 111 1e-24
U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myos... 30 3.3
U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myos... 30 3.3
U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myos... 30 3.3
U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myos... 30 3.3
M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein ( D.me... 30 3.3
AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-P... 30 3.3
AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-P... 30 3.3
AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-P... 30 3.3
AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-P... 30 3.3
AE014298-234|AAF45650.2| 628|Drosophila melanogaster CG11491-PD... 29 5.7
M68866-1|AAA28879.1| 1348|Drosophila melanogaster stranded at se... 29 7.5
AY051979-1|AAK93403.1| 1693|Drosophila melanogaster LD44801p pro... 29 7.5
AE014297-574|AAN13346.1| 1348|Drosophila melanogaster CG2507-PA,... 29 7.5
AE014297-573|AAF54052.2| 1693|Drosophila melanogaster CG2507-PB,... 29 7.5
D13964-1|BAA03067.2| 917|Drosophila melanogaster alpha-catenin ... 28 9.9
AY051780-1|AAK93204.1| 917|Drosophila melanogaster LD30423p pro... 28 9.9
AE014296-3768|AAF45466.1| 917|Drosophila melanogaster CG17947-P... 28 9.9
>BT029396-1|ABK56982.1| 167|Drosophila melanogaster IP01952p
protein.
Length = 167
Score = 111 bits (266), Expect = 1e-24
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +3
Query: 255 IVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXX 434
++TLKN+TPSPF++CY DDGR +LID+D++++ DI++HL+ VGK+
Sbjct: 65 VLTLKNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESK 124
Query: 435 DNPANFGVGCDRSCMCEVFGQVPC 506
DNPANFG GC R C+CE+ GQVPC
Sbjct: 125 DNPANFGYGCGRHCICEIPGQVPC 148
Score = 104 bits (250), Expect = 9e-23
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 243
MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN G ++ G ++F FW +PQIQ+KN
Sbjct: 1 MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60
Query: 244 PDVQ 255
P+VQ
Sbjct: 61 PEVQ 64
>BT024442-1|ABC86504.1| 167|Drosophila melanogaster IP01949p
protein.
Length = 167
Score = 111 bits (266), Expect = 1e-24
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +3
Query: 255 IVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXX 434
++TLKN+TPSPF++CY DDGR +LID+D++++ DI++HL+ VGK+
Sbjct: 65 VLTLKNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESK 124
Query: 435 DNPANFGVGCDRSCMCEVFGQVPC 506
DNPANFG GC R C+CE+ GQVPC
Sbjct: 125 DNPANFGYGCGRHCICEIPGQVPC 148
Score = 104 bits (250), Expect = 9e-23
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 243
MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN G ++ G ++F FW +PQIQ+KN
Sbjct: 1 MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60
Query: 244 PDVQ 255
P+VQ
Sbjct: 61 PEVQ 64
>AE014298-2040|AAF48377.1| 167|Drosophila melanogaster CG14413-PA
protein.
Length = 167
Score = 111 bits (266), Expect = 1e-24
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +3
Query: 255 IVTLKNLTPSPFIKCYLDDGRKILIDVDNKSKEDILEHLLHTVGKSXXXXXXXXXXXXXX 434
++TLKN+TPSPF++CY DDGR +LID+D++++ DI++HL+ VGK+
Sbjct: 65 VLTLKNMTPSPFVRCYFDDGRDMLIDLDSRNRNDIIDHLVKVVGKTREQLDAEERLKESK 124
Query: 435 DNPANFGVGCDRSCMCEVFGQVPC 506
DNPANFG GC R C+CE+ GQVPC
Sbjct: 125 DNPANFGYGCGRHCICEIPGQVPC 148
Score = 104 bits (250), Expect = 9e-23
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = +1
Query: 64 MPFMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQNNVGTKEFCFWYLPQIQYKN 243
MPFMKGR PIRRTL YLNAGKLVLKDK+++FSV YN G ++ G ++F FW +PQIQ+KN
Sbjct: 1 MPFMKGREPIRRTLKYLNAGKLVLKDKVRIFSVNYNTYGAHHAGARDFVFWNIPQIQFKN 60
Query: 244 PDVQ 255
P+VQ
Sbjct: 61 PEVQ 64
>U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle
myosin-II heavy chain protein.
Length = 1972
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 354 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 390
>U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle
myosin-II heavy chain protein.
Length = 2012
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 394 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 430
>U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle
myosin-II heavy chain protein.
Length = 2017
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 399 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 435
>U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle
myosin-II heavy chain protein.
Length = 2057
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 439 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 475
>M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein (
D.melanogaster non-musclemyosin heavy chain mRNA. ).
Length = 1972
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 354 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 390
>AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-PB,
isoform B protein.
Length = 2011
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 393 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 429
>AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-PC,
isoform C protein.
Length = 1971
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 353 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 389
>AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-PA,
isoform A protein.
Length = 2056
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 438 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 474
>AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-PD,
isoform D protein.
Length = 2016
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 571 FYLISLILIFSSHEFR*WHNTEQGTCPKTSHMHDLSH 461
F ++S +L+F S +FR N +Q T P + ++H
Sbjct: 398 FRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAH 434
>AE014298-234|AAF45650.2| 628|Drosophila melanogaster CG11491-PD,
isoform D protein.
Length = 628
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -1
Query: 516 TTPSRAPARKLHTCTIYHIQHQNLQGYPFSQPLTIPNLMFLLISLQYVVNVLRYLL 349
TTP++ P++ +I HQ+L YP +P+ + + LLI + ++ + Y L
Sbjct: 541 TTPTQTPSQAQTPTSIPMADHQDLAIYP-KRPMPLNDQYQLLIQQRQIMTLYDYYL 595
>M68866-1|AAA28879.1| 1348|Drosophila melanogaster stranded at
second protein.
Length = 1348
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 441 PANFGVGCDRSCMCEVFGQVPCSVLC 518
PAN GCD+ C CE G+V C C
Sbjct: 844 PANL-TGCDQHCYCE-NGRVECRAAC 867
>AY051979-1|AAK93403.1| 1693|Drosophila melanogaster LD44801p
protein.
Length = 1693
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 441 PANFGVGCDRSCMCEVFGQVPCSVLC 518
PAN GCD+ C CE G+V C C
Sbjct: 844 PANL-TGCDQHCYCE-NGRVECRAAC 867
>AE014297-574|AAN13346.1| 1348|Drosophila melanogaster CG2507-PA,
isoform A protein.
Length = 1348
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 441 PANFGVGCDRSCMCEVFGQVPCSVLC 518
PAN GCD+ C CE G+V C C
Sbjct: 844 PANL-TGCDQHCYCE-NGRVECRAAC 867
>AE014297-573|AAF54052.2| 1693|Drosophila melanogaster CG2507-PB,
isoform B protein.
Length = 1693
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 441 PANFGVGCDRSCMCEVFGQVPCSVLC 518
PAN GCD+ C CE G+V C C
Sbjct: 844 PANL-TGCDQHCYCE-NGRVECRAAC 867
>D13964-1|BAA03067.2| 917|Drosophila melanogaster alpha-catenin
protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 70 FMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQ-NNVGTKEFCFWYLPQI 231
F +GR P++ T++ +NA K + + K+ + I Q TK+ YL +I
Sbjct: 742 FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRI 796
>AY051780-1|AAK93204.1| 917|Drosophila melanogaster LD30423p
protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 70 FMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQ-NNVGTKEFCFWYLPQI 231
F +GR P++ T++ +NA K + + K+ + I Q TK+ YL +I
Sbjct: 742 FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRI 796
>AE014296-3768|AAF45466.1| 917|Drosophila melanogaster CG17947-PA
protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 70 FMKGRAPIRRTLNYLNAGKLVLKDKIKVFSVAYNITGQ-NNVGTKEFCFWYLPQI 231
F +GR P++ T++ +NA K + + K+ + I Q TK+ YL +I
Sbjct: 742 FTRGRGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRI 796
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,637,511
Number of Sequences: 53049
Number of extensions: 577383
Number of successful extensions: 1485
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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