Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0006
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.5  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   4.4  
AY324315-1|AAQ89700.1|  153|Anopheles gambiae insulin-like pepti...    23   5.8  
AY324313-1|AAQ89698.1|  160|Anopheles gambiae insulin-like pepti...    23   7.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.7  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 497  LPRPDPSGYKQAVKRETNDSETYEVENEQEK 589
            L R  P G ++ VK+E + +E  E E E+E+
Sbjct: 945  LLRHYPDGLQKEVKKEVDAAEDDEEEEEEEQ 975


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 94  QTPDDRLESIQNHLNKLKDDLIGNKMPLSVLAITKQ 201
           Q   DRL++ Q  L   K D++  K   SVLA   Q
Sbjct: 261 QKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATEHQ 296



 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 85  LSEQTPDDRLESI-QNHLNKLKDDLIGNKMPLSVLAITKQLTKNPNE 222
           +S +   ++LE++  N+L + KD+L+     +SV    +QLT   NE
Sbjct: 819 MSLEVTKNKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNE 865



 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 512  PSGYKQAVKRETNDSETYEVENEQE 586
            P G    + R TND E  ++E E E
Sbjct: 1048 PQGNGHLILRTTNDQEGNDMEREVE 1072


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 151 DLIGNKMPLSVLAITKQLTKNPNEYADKHTQSH 249
           DL+GN +  S L++      NP  Y D H   H
Sbjct: 343 DLLGNIVEASTLSV------NPQYYGDLHNNGH 369


>AY324315-1|AAQ89700.1|  153|Anopheles gambiae insulin-like peptide
           7 precursor protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 414 YYLAHQLHPVISRICEPIEGMDPARVADCLGLIPPDTNKLLKEKPTTRKLMRSRT-NKKS 590
           +Y   +L   ++++C    G         + L  P+T++LL E    R + R  T N +S
Sbjct: 47  HYCGAKLSDTLAKLCNRFNGFRKKSENVLMTLAGPETHQLLDE--LERDIERLHTLNDRS 104

Query: 591 TD 596
            D
Sbjct: 105 AD 106


>AY324313-1|AAQ89698.1|  160|Anopheles gambiae insulin-like peptide
           6 precursor protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 1   NSARGLDIVRLDWSXLAAEAGKFILSQILSEQTPDDR 111
           N A+  D+   DW  +     + +  Q+ S   PDDR
Sbjct: 62  NFAKPSDMATEDWMNVEDNTQQILDQQLQSVGMPDDR 98


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
 Frame = +1

Query: 1    NSARGLDIVRLDWSXLAAEAGKFILSQILSEQTPDDRLESIQNHLNKLKDD-----LIGN 165
            NS R LD+  LD++    +     +  +LSE+    R     ++     DD      +  
Sbjct: 773  NSTRNLDMQELDYNPSKKDLTDAKIHHLLSEELKPYRRHRRLSYSRHAVDDRDLSTQVNY 832

Query: 166  KMPLSV--LAITKQLTKNPNEYADKHTQSHVQW 258
            KM +++  +   K+  K      D   Q+HV +
Sbjct: 833  KMQMNIRRMISEKKHHKRSKRVKDGKQQNHVSF 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,767
Number of Sequences: 2352
Number of extensions: 11547
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)