Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0006
(609 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.3
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 1.8
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 23 2.3
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 4.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 4.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 4.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 4.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.1
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 9.4
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 426 HQLHPVISRICEPIEG 473
H+L+P S C+P+ G
Sbjct: 69 HRLYPAFSSSCDPVPG 84
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 151 DLIGNKMPLSVLAITKQLTKNPNEYADKHTQSHV 252
D++GN M S+L+ N N Y D H HV
Sbjct: 343 DVLGNIMEASILS------PNQNVYGDLHNFGHV 370
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 372 EELKNSEHLKVDFKYYLAHQ 431
EEL+ +E +VD ++YL +
Sbjct: 74 EELRRTEAFEVDLEFYLGKE 93
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 479 IHAFYWFAY 453
I+ FYWFAY
Sbjct: 438 INVFYWFAY 446
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 DTNKLLKEKPTTRKLMRSR-TNKKSTDNAKS 608
+ KLL+E+ + ++ RSR KKS N S
Sbjct: 25 EKEKLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 DTNKLLKEKPTTRKLMRSR-TNKKSTDNAKS 608
+ KLL+E+ + ++ RSR KKS N S
Sbjct: 25 EKEKLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 DTNKLLKEKPTTRKLMRSR-TNKKSTDNAKS 608
+ KLL+E+ + ++ RSR KKS N S
Sbjct: 25 EKEKLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 DTNKLLKEKPTTRKLMRSR-TNKKSTDNAKS 608
+ KLL+E+ + ++ RSR KKS N S
Sbjct: 25 EKEKLLEERTSRKRYSRSREREKKSYKNENS 55
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 599 IVGTFLVRSRPHKFPS 552
++GTF + +PH +P+
Sbjct: 441 VIGTFKLHRQPHIYPN 456
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 519 DTNKLLKEKPTTRKLMRSR-TNKKSTDNAKS 608
+ KLL+E+ + ++ RSR KKS N S
Sbjct: 258 EKEKLLEERTSRKRYSRSREREKKSYKNENS 288
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 516 PDTNKLLKEKPTTRKLMRSRT 578
PD + + ++P T+K SRT
Sbjct: 31 PDDMRTVTKRPKTKKSQGSRT 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,405
Number of Sequences: 438
Number of extensions: 3236
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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