Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0004
(596 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 23 1.7
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 23 1.7
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 23 1.7
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 23 1.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.3
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 4.0
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 22 5.3
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 22 5.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 5.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 5.3
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 6.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.2
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 453 SAWANLTGRTPIQIVGD 503
S W ++TG TP+ V D
Sbjct: 90 SQWEDVTGSTPLTFVND 106
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 23.4 bits (48), Expect = 1.7
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 309 GKYDLDFKNPDSNPGDYLSSDKLA-DVYLDFIKDFPMVSIEDPFDQDDWSAWANL 470
G +D D K N L + D + DFP +S ED + +W+ W L
Sbjct: 22 GAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWN-WNTL 75
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 23.4 bits (48), Expect = 1.7
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 309 GKYDLDFKNPDSNPGDYLSSDKLA-DVYLDFIKDFPMVSIEDPFDQDDWSAWANL 470
G +D D K N L + D + DFP +S ED + +W+ W L
Sbjct: 22 GAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWN-WNTL 75
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 23.4 bits (48), Expect = 1.7
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 309 GKYDLDFKNPDSNPGDYLSSDKLA-DVYLDFIKDFPMVSIEDPFDQDDWSAWANL 470
G +D D K N L + D + DFP +S ED + +W+ W L
Sbjct: 22 GAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLSFEDSDEGSNWN-WNTL 75
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 333 NPDSNPGDYLSSDKLADVY 389
NPD P +YL D + Y
Sbjct: 972 NPDQKPTEYLLEDSMKQQY 990
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 405 DFPMVSIEDPFDQDDWSAWANL 470
DFP +S ED + +W+ W L
Sbjct: 11 DFPSLSFEDSDEGSNWN-WNTL 31
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 166 VGDEGGFAPNIQNNKDALYLIQDAIQK 246
V + G F NI ++YL ++ I+K
Sbjct: 73 VDESGNFKENIVQELTSIYLDENVIKK 99
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 166 VGDEGGFAPNIQNNKDALYLIQDAIQK 246
V + G F NI ++YL ++ I+K
Sbjct: 73 VDESGNFKENIVQELTSIYLDENVIKK 99
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 166 VGDEGGFAPNIQNNKD 213
+GD GFA I NN D
Sbjct: 203 IGDNEGFALIIYNNSD 218
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 189 SETTFITNSRRVQSKLLLNDL 127
+E+TFI RR+ S + D+
Sbjct: 663 AESTFIPEERRIYSPITFQDV 683
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 429 DPFDQDDWSAWANLT 473
+P+D+D S W +T
Sbjct: 112 NPYDRDSLSCWLQMT 126
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 242 RKLASWQDRHWHGCSRL*VLQG 307
++L S + H HGC L + +G
Sbjct: 89 QRLTSLHELHVHGCKVLRIPEG 110
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +2
Query: 512 VTNPKRIATAVEKKACNCLLLKVNQIGS 595
+TN +R+A+ + CN L V+ +
Sbjct: 526 LTNARRVASVRAETYCNLFSLSVDHFNA 553
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +2
Query: 512 VTNPKRIATAVEKKACNCLLLKVNQIGS 595
+TN +R+A+ + CN L V+ +
Sbjct: 494 LTNARRVASVRAETYCNLFSLSVDHFNA 521
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 185 KPPSSPTAVESNPNFSLMIFFKWWYTSE 102
+PP P ++E+ S I KW + S+
Sbjct: 906 EPPQPPNSLETAMVASRSINVKWQHKSQ 933
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 185 KPPSSPTAVESNPNFSLMIFFKWWYTSE 102
+PP P ++E+ S I KW + S+
Sbjct: 902 EPPQPPNSLETAMVASRSINVKWQHKSQ 929
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,670
Number of Sequences: 438
Number of extensions: 3670
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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