Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p20
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98294-1|CAA66940.1|  631|Homo sapiens HR21spA protein.               115   1e-25
D38551-1|BAA07554.2|  635|Homo sapiens KIAA0078 protein.              115   1e-25
BC050381-1|AAH50381.1|  631|Homo sapiens RAD21 homolog (S. pombe...   115   1e-25
AY675320-1|AAT70725.1|  631|Homo sapiens RAD21 homolog (S. pombe...   115   1e-25
AL136531-7|CAO03527.1|  521|Homo sapiens RAD21-like 1 (S. pombe)...   103   7e-22
AL031665-9|CAC10381.3|  521|Homo sapiens RAD21-like 1 (S. pombe)...   103   7e-22

>X98294-1|CAA66940.1|  631|Homo sapiens HR21spA protein.
          Length = 631

 Score =  115 bits (277), Expect = 1e-25
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFYAHFVL+ +GPLAKIWLAAHWDKKLTKAHVFE N+E SV+ I+ PKVKMALRTSGHLL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>D38551-1|BAA07554.2|  635|Homo sapiens KIAA0078 protein.
          Length = 635

 Score =  115 bits (277), Expect = 1e-25
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFYAHFVL+ +GPLAKIWLAAHWDKKLTKAHVFE N+E SV+ I+ PKVKMALRTSGHLL
Sbjct: 5   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 64

Query: 621 L 623
           L
Sbjct: 65  L 65


>BC050381-1|AAH50381.1|  631|Homo sapiens RAD21 homolog (S. pombe)
           protein.
          Length = 631

 Score =  115 bits (277), Expect = 1e-25
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFYAHFVL+ +GPLAKIWLAAHWDKKLTKAHVFE N+E SV+ I+ PKVKMALRTSGHLL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AY675320-1|AAT70725.1|  631|Homo sapiens RAD21 homolog (S. pombe)
           protein.
          Length = 631

 Score =  115 bits (277), Expect = 1e-25
 Identities = 51/61 (83%), Positives = 56/61 (91%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFYAHFVL+ +GPLAKIWLAAHWDKKLTKAHVFE N+E SV+ I+ PKVKMALRTSGHLL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AL136531-7|CAO03527.1|  521|Homo sapiens RAD21-like 1 (S. pombe)
           protein.
          Length = 521

 Score =  103 bits (246), Expect = 7e-22
 Identities = 44/61 (72%), Positives = 54/61 (88%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFY H +++ +GPLAKIWLAAHW+KKLTKAHVFE N+E +++ IL PKVK+ALRTSGHLL
Sbjct: 1   MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AL031665-9|CAC10381.3|  521|Homo sapiens RAD21-like 1 (S. pombe)
           protein.
          Length = 521

 Score =  103 bits (246), Expect = 7e-22
 Identities = 44/61 (72%), Positives = 54/61 (88%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFY H +++ +GPLAKIWLAAHW+KKLTKAHVFE N+E +++ IL PKVK+ALRTSGHLL
Sbjct: 1   MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,937,012
Number of Sequences: 237096
Number of extensions: 1506572
Number of successful extensions: 2416
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2416
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)