Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p20
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF267746-1|AAF82099.1|  715|Drosophila melanogaster rad21 mitoti...   118   5e-27
AF186473-1|AAF01417.1|  715|Drosophila melanogaster mitotic cohe...   118   5e-27
AF132146-1|AAD33593.1|  715|Drosophila melanogaster DNA repair p...   118   5e-27
AF109926-1|AAD04175.1|  715|Drosophila melanogaster rad21 mitoti...   118   5e-27
AY051541-1|AAK92965.1|  518|Drosophila melanogaster GH19118p pro...    29   6.8  
AE014296-1795|AAN11920.1|  518|Drosophila melanogaster CG6640-PB...    29   6.8  
AE014296-1794|AAF50173.1|  916|Drosophila melanogaster CG6640-PA...    29   6.8  

>AF267746-1|AAF82099.1|  715|Drosophila melanogaster rad21 mitotic
           cohesin protein.
          Length = 715

 Score =  118 bits (285), Expect = 5e-27
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFY H +LA KGPLA+IWLAAHWDKK+TKAHVFETNIEKSV+GIL+PKVK+ALRTSGHLL
Sbjct: 1   MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AF186473-1|AAF01417.1|  715|Drosophila melanogaster mitotic cohesin
           SCC1 protein.
          Length = 715

 Score =  118 bits (285), Expect = 5e-27
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFY H +LA KGPLA+IWLAAHWDKK+TKAHVFETNIEKSV+GIL+PKVK+ALRTSGHLL
Sbjct: 1   MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AF132146-1|AAD33593.1|  715|Drosophila melanogaster DNA repair
           protein Rad21 protein.
          Length = 715

 Score =  118 bits (285), Expect = 5e-27
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFY H +LA KGPLA+IWLAAHWDKK+TKAHVFETNIEKSV+GIL+PKVK+ALRTSGHLL
Sbjct: 1   MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AF109926-1|AAD04175.1|  715|Drosophila melanogaster rad21 mitotic
           cohesin protein.
          Length = 715

 Score =  118 bits (285), Expect = 5e-27
 Identities = 52/61 (85%), Positives = 58/61 (95%)
 Frame = +3

Query: 441 MFYAHFVLAXKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL 620
           MFY H +LA KGPLA+IWLAAHWDKK+TKAHVFETNIEKSV+GIL+PKVK+ALRTSGHLL
Sbjct: 1   MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLL 60

Query: 621 L 623
           L
Sbjct: 61  L 61


>AY051541-1|AAK92965.1|  518|Drosophila melanogaster GH19118p
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -1

Query: 313 SDVRFLSQLYXNYTTYSFCSFDFITRCYFLILLSYEDFNSVSGFQYILL 167
           S+  +L++ Y       F    FIT  +  ++++  DFN   G+ Y  +
Sbjct: 431 SNSAYLTEAYPMGVKQHFIGLTFITEIFVFLIINVCDFNFGQGYNYFYI 479


>AE014296-1795|AAN11920.1|  518|Drosophila melanogaster CG6640-PB,
           isoform B protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -1

Query: 313 SDVRFLSQLYXNYTTYSFCSFDFITRCYFLILLSYEDFNSVSGFQYILL 167
           S+  +L++ Y       F    FIT  +  ++++  DFN   G+ Y  +
Sbjct: 431 SNSAYLTEAYPMGVKQHFIGLTFITEIFVFLIINVCDFNFGQGYNYFYI 479


>AE014296-1794|AAF50173.1|  916|Drosophila melanogaster CG6640-PA,
           isoform A protein.
          Length = 916

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -1

Query: 313 SDVRFLSQLYXNYTTYSFCSFDFITRCYFLILLSYEDFNSVSGFQYILL 167
           S+  +L++ Y       F    FIT  +  ++++  DFN   G+ Y  +
Sbjct: 829 SNSAYLTEAYPMGVKQHFIGLTFITEIFVFLIINVCDFNFGQGYNYFYI 877


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,563,734
Number of Sequences: 53049
Number of extensions: 448129
Number of successful extensions: 1151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)