Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9p14
(612 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 223 1e-58
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 1e-57
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 219 1e-57
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 219 2e-57
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 218 3e-57
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 2e-56
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 213 1e-55
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 178 3e-45
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 5e-35
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 114 5e-26
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 113 8e-26
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 113 1e-25
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 6e-25
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 8e-25
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 108 3e-24
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 81 9e-16
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 80 2e-15
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 73 2e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 42 3e-04
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 36 0.020
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 32 0.42
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 31 0.74
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 31 0.74
SB_44456| Best HMM Match : PQQ (HMM E-Value=0.73) 31 0.97
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.9
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_55264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_45529| Best HMM Match : DUF983 (HMM E-Value=0.48) 27 9.1
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 27 9.1
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 223 bits (544), Expect = 1e-58
Identities = 106/163 (65%), Positives = 124/163 (76%)
Frame = +3
Query: 117 VLNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSE 296
+L +QRECISVHVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE
Sbjct: 61 ILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSE 119
Query: 297 ADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVL 476
GK VPR V VDLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++
Sbjct: 120 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 179
Query: 477 SPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
V++RIRKLADQCTGLQ LLME+LS
Sbjct: 180 DLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 222
Score = 218 bits (532), Expect = 3e-57
Identities = 103/158 (65%), Positives = 120/158 (75%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 587 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAGK 645
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V VDLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
RIRKLADQCTGLQ LLME+LS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 743
Score = 113 bits (272), Expect = 1e-25
Identities = 53/80 (66%), Positives = 61/80 (76%)
Frame = +3
Query: 114 PVLNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFS 293
P + QRECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFS
Sbjct: 508 PRVEYQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFS 566
Query: 294 EADRGKMVPRVVMVDLEATV 353
E GK VPR V VDLE TV
Sbjct: 567 ETGAGKHVPRAVFVDLEPTV 586
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 219 bits (535), Expect = 1e-57
Identities = 104/159 (65%), Positives = 120/159 (75%)
Frame = +3
Query: 129 QRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 308
+RECISVHVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE G
Sbjct: 805 ERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAG 863
Query: 309 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 488
K VPR V DLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V+
Sbjct: 864 KHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVL 923
Query: 489 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
+RIRKLADQCTGLQ LLME+LS
Sbjct: 924 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 962
Score = 214 bits (523), Expect = 4e-56
Identities = 101/159 (63%), Positives = 118/159 (74%)
Frame = +3
Query: 129 QRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 308
QRECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T D FNTFF+E G
Sbjct: 372 QRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG-GDDAFNTFFAETGAG 430
Query: 309 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 488
K VPR V VDLE TVIDEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E + V+
Sbjct: 431 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVL 490
Query: 489 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
+R+RKLAD CTGLQ LLME+LS
Sbjct: 491 DRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 529
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 219 bits (535), Expect = 1e-57
Identities = 103/159 (64%), Positives = 121/159 (76%)
Frame = +3
Query: 129 QRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 308
+RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE G
Sbjct: 434 ERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAG 492
Query: 309 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 488
K VPR V VDLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V+
Sbjct: 493 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVL 552
Query: 489 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
+RIRKLADQCTGLQ LLME+LS
Sbjct: 553 DRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 591
Score = 218 bits (532), Expect = 3e-57
Identities = 102/158 (64%), Positives = 120/158 (75%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAGK 60
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V VDLE TV+DEVR+G YRQL+HPEQL+TGKEDAANNYARGHY+ G+E++ V++
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
RIRKLADQCTGLQ LLME+LS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 158
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 219 bits (534), Expect = 2e-57
Identities = 103/158 (65%), Positives = 120/158 (75%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAGK 59
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V VDLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 60 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD 119
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
RIRKLADQCTGLQ LLME+LS
Sbjct: 120 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 157
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 218 bits (532), Expect = 3e-57
Identities = 103/158 (65%), Positives = 119/158 (75%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECIS+HVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 2 RECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAGK 60
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V VDLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
R RKLADQCTGLQ LLME+LS
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLS 158
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 215 bits (525), Expect = 2e-56
Identities = 102/158 (64%), Positives = 118/158 (74%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECISVHVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 2 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGSGK 60
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V DLE TV+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
R+RKLAD CTGLQ LLME+LS
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 158
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 213 bits (520), Expect = 1e-55
Identities = 99/159 (62%), Positives = 120/159 (75%)
Frame = +3
Query: 129 QRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRG 308
+REC+S+HVGQAGVQMG ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE G
Sbjct: 419 ERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAG 477
Query: 309 KMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVM 488
K VPR V VDLE +VIDE+R+G YRQL+HPEQLITGKEDAANNYARGHY+ G++ + V+
Sbjct: 478 KHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVL 537
Query: 489 ERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
+RIRKLADQC+GLQ LL+E+LS
Sbjct: 538 DRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLS 576
Score = 186 bits (454), Expect = 9e-48
Identities = 88/144 (61%), Positives = 105/144 (72%)
Frame = +3
Query: 174 MGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGKMVPRVVMVDLEATV 353
MG ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK VPR V DLE TV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDS-FNTFFSETGAGKHVPRAVFCDLEPTV 59
Query: 354 IDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQX 533
+DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G++++ V++R+RKLADQCTGLQ
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQG 119
Query: 534 XXXXXXXXXXXXXXXXXLLMEKLS 605
LLME+LS
Sbjct: 120 FLIFHSFGGGTGSGFSSLLMERLS 143
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 178 bits (433), Expect = 3e-45
Identities = 90/158 (56%), Positives = 107/158 (67%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECIS+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDS-FNTFFSETGAGK 60
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V VDLE TV+ PEQLITGKEDAANNYARGHY+ G++ + V++
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
R+RKLADQC+GLQ LLME+LS
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLS 148
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 144 bits (349), Expect = 5e-35
Identities = 68/113 (60%), Positives = 80/113 (70%)
Frame = +3
Query: 267 DSCFNTFFSEADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYAR 446
D FNTFF+E GK VPR V VDLE TVIDE+R+G YRQL+HPEQL++GKEDAANNYAR
Sbjct: 11 DDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYAR 70
Query: 447 GHYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLS 605
GHY+ G+E + ++RIRKLADQCTGLQ LLME+LS
Sbjct: 71 GHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 123
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 128 bits (309), Expect = 4e-30
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = +3
Query: 291 SEADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGRE 470
SEA GK VPR V+VDLE TVIDEVR+G YR LYHPEQ+I+GKEDAANNYARGHY+ G+E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 471 VLSPVMERIRKLADQCTGLQ 530
++ VM++IRK+ DQC+GLQ
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQ 1044
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 114 bits (275), Expect = 5e-26
Identities = 56/160 (35%), Positives = 87/160 (54%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RE +S+ GQ G Q+G W++ EHGI P GT D + N +++EA GK
Sbjct: 2 REIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG---DSDLQLERINVYYNEATGGK 58
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR V++DLE +D VRSG + Q++ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 611
+RK A+ C +Q LL+ K+ +E
Sbjct: 119 VVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREE 158
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 113 bits (273), Expect = 8e-26
Identities = 58/165 (35%), Positives = 87/165 (52%)
Frame = +3
Query: 117 VLNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSE 296
+L RE + GQ G Q+G W++ EHGI P GT D + N +++E
Sbjct: 210 LLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG---DSDLQLERINVYYNE 266
Query: 297 ADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVL 476
A GK VPR V+VDLE +D VRSG + Q++ P+ + G+ A NN+A+GHY+ G E++
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 477 SPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 611
V++ +RK A+ C LQ LL+ K+ +E
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 371
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 113 bits (271), Expect = 1e-25
Identities = 56/160 (35%), Positives = 85/160 (53%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RE + GQ G Q+G W++ EHGI P GT D + N +++EA GK
Sbjct: 2 REIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG---DSDLQLERINVYYNEATGGK 58
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 491
VPR ++VDLE +D VRSG + Q++ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 492 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 611
+RK A+ C LQ LL+ K+ +E
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 111 bits (266), Expect = 6e-25
Identities = 52/83 (62%), Positives = 61/83 (73%)
Frame = +3
Query: 357 DEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQXX 536
DEVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++RIRKLADQCTGLQ
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 537 XXXXXXXXXXXXXXXXLLMEKLS 605
LLME+LS
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLS 95
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 110 bits (265), Expect = 8e-25
Identities = 51/79 (64%), Positives = 61/79 (77%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RECISVHVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ +T DS FNTFFSE GK
Sbjct: 2 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDS-FNTFFSETGGGK 60
Query: 312 MVPRVVMVDLEATVIDEVR 368
VPR V VDLE +V+ ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 108 bits (260), Expect = 3e-24
Identities = 51/82 (62%), Positives = 60/82 (73%)
Frame = +3
Query: 360 EVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQXXX 539
EVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++RIRKLADQCTGLQ
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 540 XXXXXXXXXXXXXXXLLMEKLS 605
LLME+LS
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLS 83
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 102 bits (245), Expect = 2e-22
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = +3
Query: 360 EVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQXXX 539
E+R+G YRQL+HPEQL++GKEDAANNYARGHY+ G+E + ++RIRKLADQCTGLQ
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 540 XXXXXXXXXXXXXXXLLMEKLS 605
LLME+LS
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLS 83
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 120 LNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEA 299
+ REC+S+HVGQAGVQ+G ACW+LYCLEHGI+PDG +P+ + + D F+TFFSE
Sbjct: 193 IQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPS-DQSADRCDDSFSTFFSET 251
Query: 300 DRGK 311
GK
Sbjct: 252 ASGK 255
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = +3
Query: 360 EVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKL 506
EVR+G YRQL+HPEQLITGKEDAANNYARGHY+ G+E++ V++RIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 80.6 bits (190), Expect = 9e-16
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = +3
Query: 306 GKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPV 485
GK VPR V+VDLE +D VRSG + Q++ P+ + G+ A NN+A+GHY+ G E++ V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 486 MERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 611
++ +RK A+ C +Q LL+ K+ +E
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREE 103
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +3
Query: 360 EVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKL 506
EVR G YR L+HP+QLITGKEDAANNYARGHY+ G+E + +E+IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/93 (37%), Positives = 51/93 (54%)
Frame = +3
Query: 132 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 311
RE + GQ G Q+G W++ EHGI P GT D + N +++EA GK
Sbjct: 2 REIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHG---DSDLQLERINVYYNEATGGK 58
Query: 312 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLI 410
VPR ++VDLE +D VRSG + Q++ P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/102 (31%), Positives = 54/102 (52%)
Frame = +3
Query: 306 GKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPV 485
G+ VPR ++VDLE +D VR G ++ P+ + + AANN+A+GHYS G E++ +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 486 MERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDE 611
+ +RK A+ C +Q L++ K+ +E
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREE 114
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +3
Query: 417 KEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLME 596
+ AANN+A+G Y+ G E++ M+ IRKLA+ C +Q LL+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 597 KLSDE 611
K+ +E
Sbjct: 62 KIREE 66
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 36.3 bits (80), Expect = 0.020
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Frame = +3
Query: 141 ISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTA----DSCFNTFFSEADRG 308
+++ +GQ G Q+G + L +E + + E + + FF+ +
Sbjct: 4 VTLQLGQCGNQIGRELFDLI-VEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 309 KMVPRVVMVDLEATVIDEV-----RSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREV 473
+ R V +D+E+ VI + +SG +R Y Q + K + NN+A G G +
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKS 120
Query: 474 LSPVMERIRKLADQCTGL 527
+ V++ +++ ++C L
Sbjct: 121 IDKVLDLVQREVEKCDRL 138
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 225 QVGSRAPSSIAASTRRPSGPRLGPRVRICTPSAYLKLEILVNPI 94
QVGSR P A R+ G +LGP+V + TP ++ +L NP+
Sbjct: 308 QVGSRPPKP-APQGRKGKGFKLGPKVALSTP---MEKSVLRNPV 347
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 31.1 bits (67), Expect = 0.74
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 120 LNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDG-TLPACETDPNTADSCFNT 284
++M + C S + +GV+ G W L + GI+P + P+ ++D N +NT
Sbjct: 233 VDMPKPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNT 288
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 321 RVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNY 440
R V++D+E V++ + G ++ +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_44456| Best HMM Match : PQQ (HMM E-Value=0.73)
Length = 551
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/58 (39%), Positives = 28/58 (48%)
Frame = -1
Query: 471 PRVRSNSALSRSYSPRLLYQLSTVQGDTVGGIHRNELRL*Q*PLNQPSRPSAPSSLDQ 298
PRVR +A S + R L QLS +Q + R LRL + QPS P P DQ
Sbjct: 406 PRVRIPTAQSTEETSRNLAQLSLLQRRGHPPLPRLRLRLTRLTPPQPSPPQPPQPPDQ 463
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 189 STRRPSGPRLGPRVRICT 136
S +RP GPR+GP++R+ T
Sbjct: 412 SNKRPMGPRVGPQIRVYT 429
>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 267 DSCFNTFFSEADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYH 395
DS FNT S + RGK EA +++ ++SG Y ++H
Sbjct: 94 DSSFNT--SPSVRGKTKQECQKEGYEACIVNTIKSGTYCNIWH 134
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 147 VHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPN-TADSC 275
V V + V+ G C + +C G DGT P C P T +C
Sbjct: 3562 VEVRRQNVRKGCPCAEGFCENGGTCVDGTPPYCLCSPGWTGPTC 3605
>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 246 HKRAGFRQVGSRAPSSIAASTRRPSGPRLGP 154
H R+ F ++ S A S++A + P G RLGP
Sbjct: 386 HGRSQFVKIESAASSTLALNGGIPQGTRLGP 416
>SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -1
Query: 468 RVRSNSALSRSYSPRLLYQLSTVQGDTVGGIHRNELRL*Q*PLNQPSRPSAPSSLDQP 295
RVR +A S + R L QLS +Q + R LRL + QPS P P QP
Sbjct: 115 RVRIPTAQSTEETSRNLAQLSLLQRRGHPPLPRLRLRLTRLTPPQPSPPQPPQPPPQP 172
>SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -1
Query: 468 RVRSNSALSRSYSPRLLYQLSTVQGDTVGGIHRNELRL*Q*PLNQPSRPSAPSSLDQP 295
R+R +A S + R L QLS +Q + R LRL + QPS P P QP
Sbjct: 97 RIRIPAAQSTEETSRNLAQLSLLQRRGHPPLPRLRLRLTRLTPPQPSPPQPPQPPPQP 154
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 189 WQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSE 296
W++ EHGI PDG A ++ T N +F E
Sbjct: 2 WEVIAEEHGIDPDGQCTAVQSKIQT--DRLNVYFDE 35
>SB_55264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 376 SPERTSSITVASKSTITTLGTIFPRSASEKNVLKQESAVLGSVSQAGR 233
SPER SIT +ST L R ++ L+++S++ +++ +
Sbjct: 85 SPERRRSITYKPRSTAMQLNNATGRRRPQRRELRRKSSIARFITKTAK 132
>SB_45529| Best HMM Match : DUF983 (HMM E-Value=0.48)
Length = 294
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 262 VLGSVSQAGRVPSGRIPCSKQYSCQHATPIWTPAWPTCTDMHSLCIF 122
VLG+VS A VP + +K Y + P A +C D+ ++ +F
Sbjct: 202 VLGAVSPAVVVPQLLVLQAKGYGVEQGIPTLVMAASSCDDVLAISLF 248
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = -1
Query: 333 PSRPSAPSSLDQPQKKTY*SRNPLY*DQFHKR-AGFRQVGSRAPSSIAASTRRPSGPRLG 157
P P P S + + + PLY FH GF SR P ++ T+ R
Sbjct: 1604 PGVPKTPKSSFYKRSSSDTTHRPLY-RHFHATPTGFTNTLSRTPRKLSHVTKHELSARRR 1662
Query: 156 PRVRICTPS 130
PR+ T S
Sbjct: 1663 PRLVATTTS 1671
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,695,017
Number of Sequences: 59808
Number of extensions: 351087
Number of successful extensions: 1174
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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