Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p09
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19155-3|CAA79558.2|  812|Caenorhabditis elegans Hypothetical pr...    36   0.023
Z81072-1|CAB03019.1|  311|Caenorhabditis elegans Hypothetical pr...    35   0.031
U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified vi...    32   0.29 
U28731-1|AAA68298.1|  145|Caenorhabditis elegans Hypothetical pr...    30   0.88 
AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    29   2.0  
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    29   2.0  
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    28   4.7  
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        28   4.7  
U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    27   6.2  
U58738-1|AAB00602.1|  290|Caenorhabditis elegans Hypothetical pr...    27   6.2  
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas...    27   8.2  
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ...    27   8.2  
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z19155-3|CAA79558.2|  812|Caenorhabditis elegans Hypothetical
           protein F54G8.2 protein.
          Length = 812

 Score = 35.5 bits (78), Expect = 0.023
 Identities = 20/77 (25%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = +1

Query: 214 YDLLGEGHLRRETMYQLMKK--SLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTD 387
           YD  G G L +  +  ++++  ++A+  + D +E  +++++  M+  +D D+DG+++F +
Sbjct: 182 YDSDGNGFLDKSEIDGIIEQMMNVARYQQWDTIE--LEQVIRQMMVDIDYDNDGIVSFDE 239

Query: 388 FRQCVLTTPSLIESLGY 438
           +R+  LT   L+  LG+
Sbjct: 240 WRRGGLTNIPLLVLLGF 256


>Z81072-1|CAB03019.1|  311|Caenorhabditis elegans Hypothetical
           protein F30A10.1 protein.
          Length = 311

 Score = 35.1 bits (77), Expect = 0.031
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +1

Query: 265 MKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIES 429
           + K +   +RD+  +  V+ +++ +++  DLD D  INF +F   V  +P  I +
Sbjct: 252 LSKMIRSLTRDELSDVEVEFIIERIIEEADLDGDSSINFAEFEHVVSRSPDFIRT 306


>U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 2 protein.
          Length = 156

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 18/59 (30%), Positives = 35/59 (59%)
 Frame = +1

Query: 214 YDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDF 390
           +DL G+G+++RE +  +M+K + ++  +D+        +D M +  D D DG I+F +F
Sbjct: 30  FDLNGDGYIQREELRAVMQK-MGQSPTEDE--------LDAMFQAADKDCDGNIDFQEF 79


>U28731-1|AAA68298.1|  145|Caenorhabditis elegans Hypothetical
           protein F12A10.5 protein.
          Length = 145

 Score = 30.3 bits (65), Expect = 0.88
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +1

Query: 337 MLKRMDLDHDGVINFTDF 390
           M+K+ DLDHDG+I+F +F
Sbjct: 121 MIKQGDLDHDGMIDFQEF 138


>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 307 EEAVKELVDIMLKRMDLDHDGVINFTDF 390
           E+   E VD M++  D+D DG +N+ +F
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEF 142


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 307 EEAVKELVDIMLKRMDLDHDGVINFTDF 390
           E+   E VD M++  D+D DG +N+ +F
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEF 142


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 319 KELVDIMLKRMDLDHDGVINFTDF 390
           +E VD M+K +D+D DG I++ +F
Sbjct: 188 EEEVDEMIKEVDVDGDGEIDYEEF 211


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 319 KELVDIMLKRMDLDHDGVINFTDF 390
           +E VD M+K +D+D DG I++ +F
Sbjct: 131 EEEVDEMIKEVDVDGDGEIDYEEF 154


>U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical
           protein C56G2.4 protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 105 DSALDPMEEIRFRKKHGSMWMEIQKDTHFT 194
           D  +DP+E  R RK+    W  +Q D  +T
Sbjct: 122 DPDMDPVEPFRIRKRPEITWSGLQYDEQYT 151


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 109 QPWIQWRRYVLEKNMALCGWKYKKIRTSLLMN*KCYDLLGE 231
           QP+      + EK   L  W+YK+    LL N +C  L+GE
Sbjct: 60  QPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGE 100


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 109 QPWIQWRRYVLEKNMALCGWKYKKIRTSLLMN*KCYDLLGE 231
           QP+      + EK   L  W+YK+    LL N +C  L+GE
Sbjct: 60  QPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGE 100


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 93   STSLDSALDPMEEIRFRKKHGSMW 164
            ST  D    P+EE+R R KH   W
Sbjct: 1674 STECDQTKKPVEEVRCRTKHCPRW 1697


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 93   STSLDSALDPMEEIRFRKKHGSMW 164
            ST  D    P+EE+R R KH   W
Sbjct: 1674 STECDQTKKPVEEVRCRTKHCPRW 1697


>U58738-1|AAB00602.1|  290|Caenorhabditis elegans Hypothetical
           protein F31A9.4 protein.
          Length = 290

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -2

Query: 375 NHSIVIQIHTLQHNVNEFLDRLFDVIISRRFRKTLLHELIHR 250
           +H IV     L  N+  F D++ +  +   + K  L  LIHR
Sbjct: 167 DHPIVTSAKLLVFNIATFFDKIRNTRVHFTYSKRTLRNLIHR 208


>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1276

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 124 WRRYVLEKNMALCGWKYK 177
           WRRY LE+ +A   WK +
Sbjct: 537 WRRYKLEQELAAMSWKIR 554


>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
           protein T01A4.1a protein.
          Length = 1217

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 124 WRRYVLEKNMALCGWKYK 177
           WRRY LE+ +A   WK +
Sbjct: 491 WRRYKLEQELAAMSWKIR 508


>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
           protein T01A4.1c protein.
          Length = 1276

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 124 WRRYVLEKNMALCGWKYK 177
           WRRY LE+ +A   WK +
Sbjct: 537 WRRYKLEQELAAMSWKIR 554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,539,768
Number of Sequences: 27780
Number of extensions: 222747
Number of successful extensions: 720
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)