Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p08
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4VF24 Cluster: Putative uncharacterized protein; n=1; ...    39   0.10 
UniRef50_A7A9Y2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q4XX71 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_Q16XH2 Cluster: RHC18, putative; n=1; Aedes aegypti|Rep...    33   6.9  

>UniRef50_A4VF24 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 123

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 26/80 (32%), Positives = 38/80 (47%)
 Frame = -1

Query: 272 STTKHLFLKHNT*KATSHFVTIKKKSLLIFLINFNRYYNNIISVTVTVTFSECNNYIKCT 93
           +T K+LFL   + K TS+F+ +K   L  +  N+  Y  N  S+ V   F   N  +KC 
Sbjct: 29  TTKKNLFLLEESYKQTSYFLDLKTILLQKYQSNYTEY--NRKSINVNYLFFRINIRLKCK 86

Query: 92  DCNNLRLGVNCITIMSAYKK 33
            C   R+   C  I + Y K
Sbjct: 87  SC---RVCYQCTQIQTKYWK 103


>UniRef50_A7A9Y2 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 535

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -1

Query: 179 INFNRYYNNIISVTVTVTFSECNNYIKCTDCNNLRLGVNCITIMSAYKKKL 27
           +NF+ Y  ++ +  +T  + EC  YI    CNN+   +N ++ MS   KKL
Sbjct: 81  VNFDTYNISLTAGQITKIWEEC--YIGINACNNVTYFINSVSDMSDSDKKL 129


>UniRef50_Q4XX71 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 474

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -1

Query: 290 CAELFRSTTKHLFLKHNT*KATSHF---VTIKKKSLLIFLINFNRYYNNIISVTVTVTFS 120
           C  LF++    L   +   K T  F   V I  K  LI L + N   NN+     ++ F 
Sbjct: 324 CISLFQALEDFLLQSYT--KMTESFFDLVPITNKVYLIHLYSLNYNINNMNKCENSIIFK 381

Query: 119 ECNNYIKCTDCNNLR 75
            C N +   DC +LR
Sbjct: 382 NCLNELFLDDCKSLR 396


>UniRef50_Q16XH2 Cluster: RHC18, putative; n=1; Aedes aegypti|Rep:
           RHC18, putative - Aedes aegypti (Yellowfever mosquito)
          Length = 1239

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 446 FQHPLLKIKTERISCIEAYIESTFASVFERKGLTEADWLEE 568
           FQH L K KT+ +  +E  + +      ER G TE++W+E+
Sbjct: 826 FQHEL-KCKTDEVEQLEEKLTAALKESVERVGRTESEWVEK 865


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,674,048
Number of Sequences: 1657284
Number of extensions: 10019095
Number of successful extensions: 19687
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19673
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)