Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p04
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    26   1.3  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   8.9  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   8.9  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
 Frame = +1

Query: 259 QHVVKCSECKEATPIKNAPPGKKYVRCPCNC---LLICKSSSQRIACPRAD 402
           +H  +C E +E  P   A PG +    PC     L  C  S   + C R D
Sbjct: 63  RHFCECKETREPLPYMYACPGTE----PCQSSDRLGSCSKSMHDVLCDRID 109


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 490 CQDTFLYQSLKNMPVRCPHCRKVSFVRSPSGGSKARV 600
           C D  ++    N  VRCP  R+   V + S  S  R+
Sbjct: 20  CWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRL 56


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 106 LLRIEEVACDDVSTISPIGPDELPPPYQQ 192
           LLR  ++   +V+ ISPI P   PP + Q
Sbjct: 2   LLRCSKIRSYEVNNISPISP---PPVFLQ 27


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 601 KGIIFAVLAVIFLIIALGVTLGTLS 675
           KG+I + +  I  +I L   LGTLS
Sbjct: 327 KGMIVSFMVPISFLIILTTVLGTLS 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,128
Number of Sequences: 2352
Number of extensions: 19211
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)