Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p04
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020947-1|AAH20947.1|  277|Homo sapiens transmembrane protein 5...   184   2e-46
BC002867-1|AAH02867.2|  277|Homo sapiens transmembrane protein 5...   184   3e-46
BC033892-1|AAH33892.1|  257|Homo sapiens transmembrane protein 5...   175   1e-43
L47665-1|AAC41926.1|  419|Homo sapiens K+ channel beta-subunit p...    31   5.0  
AK092533-1|BAC03911.1|  325|Homo sapiens protein ( Homo sapiens ...    31   5.0  

>BC020947-1|AAH20947.1|  277|Homo sapiens transmembrane protein 55B
           protein.
          Length = 277

 Score =  184 bits (449), Expect = 2e-46
 Identities = 92/177 (51%), Positives = 111/177 (62%), Gaps = 8/177 (4%)
 Frame = +1

Query: 163 PDELPPPYQQV------GMPMVSCRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGK 324
           P E PPPY  +        PM++CRVCQ+LI++ GK  QHVVKC  C EATPIKNAPPGK
Sbjct: 61  PGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGK 120

Query: 325 KYVRCPCNCLLICKSSSQRIACPRADCKRIINLAXXXXXXXXXXXXGMD-RVICAHCQDT 501
           KYVRCPCNCLLICK +SQRIACPR  CKRIINL              M  RVIC HC++T
Sbjct: 121 KYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPMGVRVICGHCKNT 180

Query: 502 FLYQSLKNMPV-RCPHCRKVSFVRSPSGGSKARVKGIIFAVLAVIFLIIALGVTLGT 669
           FL+    +  + RCPHCRKVS +    G    R + I   +L ++  + A G+  GT
Sbjct: 181 FLWTEFTDRTLARCPHCRKVSSI----GRRYTRKRCICCFLLGLLLAVTATGLAFGT 233


>BC002867-1|AAH02867.2|  277|Homo sapiens transmembrane protein 55B
           protein.
          Length = 277

 Score =  184 bits (448), Expect = 3e-46
 Identities = 92/177 (51%), Positives = 111/177 (62%), Gaps = 8/177 (4%)
 Frame = +1

Query: 163 PDELPPPYQQV------GMPMVSCRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGK 324
           P E PPPY  +        PM++CRVCQ+LI++ GK  QHVVKC  C EATPIKNAPPGK
Sbjct: 61  PGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGK 120

Query: 325 KYVRCPCNCLLICKSSSQRIACPRADCKRIINLAXXXXXXXXXXXXGMD-RVICAHCQDT 501
           KYVRCPCNCLLICK +SQRIACPR  CKRIINL              M  RVIC HC++T
Sbjct: 121 KYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPMGVRVICGHCKNT 180

Query: 502 FLYQSLKNMPV-RCPHCRKVSFVRSPSGGSKARVKGIIFAVLAVIFLIIALGVTLGT 669
           FL+    +  + RCPHCRKVS +    G    R + I   +L ++  + A G+  GT
Sbjct: 181 FLWTEFTDRTLARCPHCRKVSSI----GRRYPRKRCICCFLLGLLLAVTATGLAFGT 233


>BC033892-1|AAH33892.1|  257|Homo sapiens transmembrane protein 55A
           protein.
          Length = 257

 Score =  175 bits (426), Expect = 1e-43
 Identities = 85/181 (46%), Positives = 114/181 (62%), Gaps = 14/181 (7%)
 Frame = +1

Query: 169 ELPPPYQQV------GMPMVSCRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGKKY 330
           ELPPPY  +      G+P+++CRVCQ+LI++ GK  QHVVKC+ C EATPIKN P GKKY
Sbjct: 37  ELPPPYTAIASPDASGIPVINCRVCQSLINLDGKLHQHVVKCTVCNEATPIKNPPTGKKY 96

Query: 331 VRCPCNCLLICKSSSQRIACPRADCKRIINLAXXXXXXXXXXXXGM-------DRVICAH 489
           VRCPCNCLLICK +S+RI CPR +C+RIINL                       RV+C H
Sbjct: 97  VRCPCNCLLICKDTSRRIGCPRPNCRRIINLGPVMLISEEQPAQPALPIQPEGTRVVCGH 156

Query: 490 CQDTFLYQSLK-NMPVRCPHCRKVSFVRSPSGGSKARVKGIIFAVLAVIFLIIALGVTLG 666
           C +TFL+  L+ N   +CPHC+K+S V    G +  R +   +  + +I + I +G+T+G
Sbjct: 157 CGNTFLWMELRFNTLAKCPHCKKISSV----GSALPRRRCCAYITIGMICIFIGVGLTVG 212

Query: 667 T 669
           T
Sbjct: 213 T 213


>L47665-1|AAC41926.1|  419|Homo sapiens K+ channel beta-subunit
           protein.
          Length = 419

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -2

Query: 308 FFIGVASLHSEHFTTCCSFFPRMSISAWHTRQETIGIPTC*YGGGNSSGPIGEIVLTSSH 129
           +++ +  L SEH T C +  P  ++     R   +G+ T    GG  S  + E ++T ++
Sbjct: 70  WYLKLCDLSSEHTTVCTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAY 129


>AK092533-1|BAC03911.1|  325|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35214 fis, clone PROST1000512, highly similar to
           Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
          Length = 325

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +3

Query: 240 HSWEKRATCSEMFRMQRSYAYKECSARQEVCSVPLQLP---TNLQVIFATYSLSSC*LQE 410
           HS    AT S  F    S+  +  S+R     +  QLP   +    +  T  LSS     
Sbjct: 44  HSSFSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPS 103

Query: 411 DYQPSTITSYSTCAHSA 461
              PST++SY   +HS+
Sbjct: 104 PSAPSTVSSYVPSSHSS 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,560,686
Number of Sequences: 237096
Number of extensions: 2542098
Number of successful extensions: 5927
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5919
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)