Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9p04
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-26|AAK29977.2|  300|Caenorhabditis elegans Hypothetical...   152   2e-37
U41109-10|AAB37042.2|  169|Caenorhabditis elegans Hypothetical p...    32   0.44 
Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z37139-6|CAB63431.2|  591|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL021571-3|CAC70102.2|  344|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF016439-2|AAB65897.1|  176|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z99278-5|CAB16489.1|  290|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF022388-1|AAC38956.1|  290|Caenorhabditis elegans putative tran...    28   7.1  
AF099919-6|AAC68803.1|  261|Caenorhabditis elegans Hypothetical ...    27   9.4  

>AC024859-26|AAK29977.2|  300|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.2 protein.
          Length = 300

 Score =  152 bits (369), Expect = 2e-37
 Identities = 77/170 (45%), Positives = 99/170 (58%), Gaps = 16/170 (9%)
 Frame = +1

Query: 208 VSCRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGKKYVRCPCNCLLICKSSSQRIA 387
           V CRVC   + + G+ +QHVVKC  C EATPI+ APPGKKYVRCPCNCLLICK+SS RIA
Sbjct: 59  VLCRVCDVAVSLEGRNQQHVVKCHSCDEATPIRPAPPGKKYVRCPCNCLLICKASSTRIA 118

Query: 388 CPRADCKRIINLA----------------XXXXXXXXXXXXGMDRVICAHCQDTFLYQSL 519
           CPR +C+R+I LA                            G  RV C HC + FL+ +L
Sbjct: 119 CPRNNCRRVITLAGQRDPGTAIRAPIFPGQRDPGTAIRAPTGSCRVKCNHCNEIFLFNTL 178

Query: 520 KNMPVRCPHCRKVSFVRSPSGGSKARVKGIIFAVLAVIFLIIALGVTLGT 669
            N    CPHC+K S V     GS AR + ++F +LA    ++A+ +T+ T
Sbjct: 179 TNALANCPHCKKYSTV-----GSFARRRALLFFILAATVAVLAVILTMLT 223


>U41109-10|AAB37042.2|  169|Caenorhabditis elegans Hypothetical
           protein F52E1.9 protein.
          Length = 169

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = +1

Query: 472 RVICAHCQDTFLYQSLKNMPVRCPHCRKVSFVRSPSGGSKARVKGIIFAVLAVIFLIIAL 651
           R +C HC + FL+ S   + + CP C       S + G+  R +  +  V+  I LII++
Sbjct: 63  RYVCPHCDEQFLFHSTNGL-LTCPFC-----YTSIAIGTYNRKQMYLNFVVGTIVLIISM 116

Query: 652 GVTL 663
            +T+
Sbjct: 117 VMTI 120


>Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical
           protein R10E4.4 protein.
          Length = 759

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
 Frame = +1

Query: 166 DELPPPYQQVGMPMVS-----CRVCQALIDIRGKKEQHVVKCSECKEATPIKNAPPGKKY 330
           DE P   +QV    VS       +  A   +R K  +  ++C +CK   P  +  PG + 
Sbjct: 131 DEYPTSLRQVKSAQVSQVVKISGIIVAAAQVRSKATKVTLQCRQCKHTIPDVSIKPGLEG 190

Query: 331 VRCPCNCLLICKSSSQRIACP 393
              P  C    +   QR  CP
Sbjct: 191 FALPRTCAAPQQGQMQR--CP 209


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
           protein ZK617.1b protein.
          Length = 7158

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 85  SQSENQALLRIEEVACDDVSTISPIGPDELPPP 183
           SQSE++   R +++  D VS  S   PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
           protein ZK617.1a protein.
          Length = 6839

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 85  SQSENQALLRIEEVACDDVSTISPIGPDELPPP 183
           SQSE++   R +++  D VS  S   PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
           protein ZK617.1b protein.
          Length = 7158

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 85  SQSENQALLRIEEVACDDVSTISPIGPDELPPP 183
           SQSE++   R +++  D VS  S   PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
           protein ZK617.1a protein.
          Length = 6839

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 85  SQSENQALLRIEEVACDDVSTISPIGPDELPPP 183
           SQSE++   R +++  D VS  S   PD LPPP
Sbjct: 276 SQSESRRSSRTDKMEVDQVSGASKRKPDGLPPP 308


>Z37139-6|CAB63431.2|  591|Caenorhabditis elegans Hypothetical
           protein C14B1.10 protein.
          Length = 591

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 196 GMPMVSCRVCQALIDIRGKKEQHVVKC 276
           G+  + C +C  L DI  KK+ HV +C
Sbjct: 410 GLLKIGCDMCMGLCDIARKKDCHVARC 436


>Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical
           protein T04D3.2 protein.
          Length = 604

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 521 RTCLFGVLTVGRYHLFVHHPAVPKL 595
           RT   GV   G+Y++F  HPA PKL
Sbjct: 94  RTRTIGVQRFGQYYMFNKHPASPKL 118


>Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical
           protein T02E9.1 protein.
          Length = 376

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 505 LYQSLKNMPVRCPHCRKVSFVRSPSGGSK 591
           L     ++P+ CPHC     +RS S G K
Sbjct: 345 LTSKFDDVPLMCPHCEAQLSIRSSSNGKK 373


>AL021571-3|CAC70102.2|  344|Caenorhabditis elegans Hypothetical
           protein T19A6.4 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 314 GAFFIGVASLHSEHFTTCCSFFPRMSISAW 225
           G FFIG   L        CSF P + +SAW
Sbjct: 278 GGFFIGNQKLSQTISYPICSFAPGLIVSAW 307


>AF016439-2|AAB65897.1|  176|Caenorhabditis elegans Hypothetical
           protein R02F11.1 protein.
          Length = 176

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +1

Query: 265 VVKCSECKEATPIKNAPPG----KKYVRCPCNCLLICKSSSQ 378
           V+   + KEA  I+ A       K+   CP NC   C SSSQ
Sbjct: 19  VLNAEDAKEAPEIREANSTVFRQKRQFGCPSNCYSSCSSSSQ 60


>Z99278-5|CAB16489.1|  290|Caenorhabditis elegans Hypothetical
           protein Y53C12B.5a protein.
          Length = 290

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 250 KKEQHVVKCSECKEATPIKNAPPGKKYVRCPC-NCLLI 360
           +K  +  +C    E  P K   P  +Y++CPC  C ++
Sbjct: 23  EKNYYCQRCLNHGELKPRKGHKPDCRYLKCPCRECTMV 60


>AF022388-1|AAC38956.1|  290|Caenorhabditis elegans putative
           transcription factor MAB-3 protein.
          Length = 290

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 250 KKEQHVVKCSECKEATPIKNAPPGKKYVRCPC-NCLLI 360
           +K  +  +C    E  P K   P  +Y++CPC  C ++
Sbjct: 23  EKNYYCQRCLNHGELKPRKGHKPDCRYLKCPCRECTMV 60


>AF099919-6|AAC68803.1|  261|Caenorhabditis elegans Hypothetical
           protein F40G9.14 protein.
          Length = 261

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
 Frame = +1

Query: 346 NCLLICKSSSQRIACPRADCKRI-INLAXXXXXXXXXXXXGMDRVICAHCQDTFLYQSLK 522
           +C+ +CK   Q I CP        IN +              D + C  CQ T+  Q+  
Sbjct: 165 SCIQVCKHQFQ-IKCPFCTTTSYQINFSTNKLILEVLNGKSKDTLSCTSCQLTYSSQTFP 223

Query: 523 NMPVRCPH 546
            +   C H
Sbjct: 224 RIHPSCGH 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,437,478
Number of Sequences: 27780
Number of extensions: 397980
Number of successful extensions: 1143
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)