Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9o23
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.79 
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   2.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   9.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 387 WKISNHTLEIQTMLEKIILYSVKLRAVIYIVITV 488
           W +  H  EI TML  ++  ++ +  V+YI+I +
Sbjct: 215 WTLIEHAFEISTMLFFVLPMTIII--VLYILIAI 246


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 435 FFLTLSVFLKCDLKSSKSSQHLTSKCC 355
           +F+T ++ +KC+ K      H+  K C
Sbjct: 20  YFVTPTMSIKCNCKRHVIKPHICRKIC 46


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 293 NDTLLKRKATTYFMQYMETIGQHLLVKCWL 382
           N  LLK +   Y   Y+  + Q + V  W+
Sbjct: 35  NVNLLKNRTGRYMFTYLHLLYQDVHVMIWI 64


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 265 FKNIFRI*SRHRPHAS 218
           +KNI    +RH PHAS
Sbjct: 416 YKNIREDDARHIPHAS 431


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 423 LSVFLKCDLKSSKSSQHLTSKCCP 352
           + V L CD +S K+ + + S C P
Sbjct: 32  VDVTLACDGRSLKAHRVVLSACSP 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,216
Number of Sequences: 438
Number of extensions: 3562
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)