Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9o20
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 30 1.3
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 30 1.3
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 30 1.3
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.4
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 27 7.2
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ... 27 9.5
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = -1
Query: 442 IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQSPPGNWPTSPA 263
++ PEP+ P+ A V+ + P P++A+ P+T + + P + P P+
Sbjct: 810 VNVPEPEKKTPVLAKKTPVKPRDPSPKKAVPAK--PSTKTDAPPVSVKKPEPVSKPKEPS 867
Query: 262 PPRVQLATP 236
P + + +P
Sbjct: 868 PKKAEPNSP 876
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 442 IDSPEPDSFVPIAAHGAEVRRQQPKPRRA 356
+ +PEP+ P+ A A + + P P++A
Sbjct: 1000 VSAPEPEKKTPVLAKKAPAKPRDPSPKKA 1028
>Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical
protein T05F1.4 protein.
Length = 203
Score = 31.1 bits (67), Expect = 0.58
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -2
Query: 390 RYADNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQ 286
R +++S++ EH +N QQ + ++ P +NH+Q
Sbjct: 46 RRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQ 80
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 360 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 262
+H + Q QQ+Q EQ Q HH Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 360 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 262
+H + Q QQ+Q EQ Q HH Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 360 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 262
+H + Q QQ+Q EQ Q HH Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -1
Query: 370 KPRRALV*SN*PTTSGQHGAATTDQSPPGNWPTSPAPPRVQLATP*RN*PCHSHSVLTKT 191
KP A TT+ + TT P PT P+P V+ AT P S S T T
Sbjct: 480 KPTEAPTTEEPTTTTTEEPTTTTTTEEPTEAPTEPSPTTVE-ATEASTTPEASTSSETST 538
Query: 190 TE 185
TE
Sbjct: 539 TE 540
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 381 DNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQETGQHH 268
D+ Q HD+ Y+Q QQ+ PPQ Q+ GQ++
Sbjct: 327 DDQQYHDD--YSQ--QQQYQMQNYPPQQQQQQQYGQYY 360
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 342 INQQRQDSTEQPPQTNHHQETGQHHLRL 259
++ + +D+ PP+ +HHQ HH L
Sbjct: 1600 VSSRHRDNQSAPPRHHHHQPHPPHHPHL 1627
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 342 INQQRQDSTEQPPQTNHHQETGQHHLRL 259
++ + +D+ PP+ +HHQ HH L
Sbjct: 1761 VSSRHRDNQSAPPRHHHHQPHPPHHPHL 1788
>Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical
protein F43G6.3 protein.
Length = 172
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 34 PSPLTQRQLRRRSLYTSLYYATRAIDEIASDMQTDRCRWSRSLL 165
P T+ + ++ L TSL ++R D++ + DRC SR L
Sbjct: 128 PKSETRPRHKKYLLATSLLLSSRIFDQLWRNFALDRCLTSRGTL 171
>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1015
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 387 YADNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQETGQHHLRLLVFN*P-RLKE 229
+ +N Q + ++ I Q Q+S + H HHL + +FN P R++E
Sbjct: 473 FVENEQGTLQPTFSMIYQTNQESWRSICEKTRHVMPIHHHLPIEMFNTPTRIRE 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,450,946
Number of Sequences: 27780
Number of extensions: 291856
Number of successful extensions: 1127
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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