Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9o18
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027911-1|AAH27911.1|  416|Homo sapiens jumonji domain containi...    40   0.005
AY345239-1|AAQ23080.1|  220|Homo sapiens hypothetical protein FL...    40   0.005
AK023860-1|BAB14706.1|  416|Homo sapiens protein ( Homo sapiens ...    38   0.032

>BC027911-1|AAH27911.1|  416|Homo sapiens jumonji domain containing
           5 protein.
          Length = 416

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = +2

Query: 362 QAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWKDPNNPMDDLLKESYKIIDFG 541
           + I+DY  EK+N G W+DV    R+   I   LK L   + P +   + +  + ++ D G
Sbjct: 69  EVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDA--NTVAAALRVCDMG 126

Query: 542 LVFG 553
           L+ G
Sbjct: 127 LLMG 130


>AY345239-1|AAQ23080.1|  220|Homo sapiens hypothetical protein
           FLJ13798 protein.
          Length = 220

 Score = 40.3 bits (90), Expect = 0.005
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = +2

Query: 362 QAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWKDPNNPMDDLLKESYKIIDFG 541
           + I+DY  EK+N G W+DV    R+   I   LK L   + P +   + +  + ++ D G
Sbjct: 69  EVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDA--NTVAAALRVCDMG 126

Query: 542 LVFG 553
           L+ G
Sbjct: 127 LLMG 130


>AK023860-1|BAB14706.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13798 fis, clone THYRO1000124. ).
          Length = 416

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 362 QAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWKDPNNPMDDLLKESYKIIDFG 541
           + I+ Y  EK+N G W+DV    R+   I   LK L   + P +   + +  + ++ D G
Sbjct: 69  EVILGYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDA--NTVAAALRVCDMG 126

Query: 542 LVFG 553
           L+ G
Sbjct: 127 LLMG 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,081,618
Number of Sequences: 237096
Number of extensions: 1136845
Number of successful extensions: 1876
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1876
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)