Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9o18
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071164-1|AAL48786.2|  319|Drosophila melanogaster RE20777p pro...    30   1.9  
AE013599-1172|AAF58752.1|  309|Drosophila melanogaster CG12936-P...    30   1.9  
M69216-2|AAA51465.1|  661|Drosophila melanogaster HFL1 protein.        29   3.3  

>AY071164-1|AAL48786.2|  319|Drosophila melanogaster RE20777p
           protein.
          Length = 319

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 242 LPNVELSLSE-VIELDGCTKSLLNHFIKNPNTLNQRTLIKIQAI--IDYMHEKINIGNWK 412
           LP V L ++E +I    C K L++HF  +P  +     +KI+       +H +  IGN  
Sbjct: 243 LPMVTLEVAESIIAQYPCPKKLIDHFSSDPLAVQSLADLKIKRCNGPQPLHTERRIGNVL 302

Query: 413 DVKLY 427
             KLY
Sbjct: 303 SNKLY 307


>AE013599-1172|AAF58752.1|  309|Drosophila melanogaster CG12936-PA
           protein.
          Length = 309

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 242 LPNVELSLSE-VIELDGCTKSLLNHFIKNPNTLNQRTLIKIQAI--IDYMHEKINIGNWK 412
           LP V L ++E +I    C K L++HF  +P  +     +KI+       +H +  IGN  
Sbjct: 233 LPMVTLEVAESIIAQYPCPKKLIDHFSSDPLAVQSLADLKIKRCNGPQPLHTERRIGNVL 292

Query: 413 DVKLY 427
             KLY
Sbjct: 293 SNKLY 297


>M69216-2|AAA51465.1|  661|Drosophila melanogaster HFL1 protein.
          Length = 661

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/75 (18%), Positives = 34/75 (45%)
 Frame = +2

Query: 308 NHFIKNPNTLNQRTLIKIQAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWKDP 487
           N F K   T++         ++   +   N     +++ Y+R+ + +S   +++ +WK+ 
Sbjct: 538 NLFPKKNKTISSENEFFFPKLVTESNSNFNESPLDEIERYIRQRVPLSQNFEVIEWWKNN 597

Query: 488 NNPMDDLLKESYKII 532
            N    L K + K++
Sbjct: 598 ANLYPQLSKLALKLL 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,651,537
Number of Sequences: 53049
Number of extensions: 349681
Number of successful extensions: 791
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)