Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9o18
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ...    31   0.75 
Z81571-7|CAB04620.1|  272|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      29   1.7  
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      29   1.7  
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    29   1.7  
Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81523-3|CAB04242.1|  163|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
            protein K10B4.1 protein.
          Length = 1210

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
 Frame = +2

Query: 251  VELSLSEVIELDGCTKSL-LNHFIKNPNTLNQRTL-IKIQAIIDYMHEKINIG------N 406
            + LS S+  E DGC  +     FI   +  +Q+TL I + ++    HE+I         N
Sbjct: 855  ITLSQSDESEQDGCVSAPDAPCFIAGDDRNSQQTLLIAVHSVFHREHERITTTLKEINPN 914

Query: 407  WKDVKLYLRKTITISSYLKLLIY 475
            W D K+Y      IS+    ++Y
Sbjct: 915  WDDEKIYQETRKLISAEFAHIVY 937


>Z81571-7|CAB04620.1|  272|Caenorhabditis elegans Hypothetical
           protein M01G12.9 protein.
          Length = 272

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 368 IIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWKDPNNPMDD 505
           +IDY H KIN  +  ++K+     +   +YL  L      NNP+ D
Sbjct: 8   VIDYYHSKINKDSKMEIKIGELPKVLNKTYLGKLNATPSMNNPVKD 53


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +2

Query: 260 SLSEVIELDGCTKSLLNHFIKNPNTLNQRTLIKIQAIIDYMHEKIN--IGNWKDVKLYLR 433
           +L++   L G  KS  ++F  N N    R L++ + II Y + ++   IG+ K V     
Sbjct: 147 TLAQRYNLPGLVKSATDYFDSNLN----RCLLESRDIIGYTYTQLTRLIGDPKYVDC--- 199

Query: 434 KTITISSYLKLLIYW 478
             IT  +YLKL++ W
Sbjct: 200 --ITSDTYLKLIVRW 212


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +2

Query: 260 SLSEVIELDGCTKSLLNHFIKNPNTLNQRTLIKIQAIIDYMHEKIN--IGNWKDVKLYLR 433
           +L++   L G  KS  ++F  N N    R L++ + II Y + ++   IG+ K V     
Sbjct: 147 TLAQRYNLPGLVKSATDYFDSNLN----RCLLESRDIIGYTYTQLTRLIGDPKYVDC--- 199

Query: 434 KTITISSYLKLLIYW 478
             IT  +YLKL++ W
Sbjct: 200 --ITSDTYLKLIVRW 212


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +2

Query: 260 SLSEVIELDGCTKSLLNHFIKNPNTLNQRTLIKIQAIIDYMHEKIN--IGNWKDVKLYLR 433
           +L++   L G  KS  ++F  N N    R L++ + II Y + ++   IG+ K V     
Sbjct: 147 TLAQRYNLPGLVKSATDYFDSNLN----RCLLESRDIIGYTYTQLTRLIGDPKYVDC--- 199

Query: 434 KTITISSYLKLLIYW 478
             IT  +YLKL++ W
Sbjct: 200 --ITSDTYLKLIVRW 212


>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/83 (16%), Positives = 40/83 (48%)
 Frame = +2

Query: 176 TTIPTIPTMSDVLDLCRKFELFLPNVELSLSEVIELDGCTKSLLNHFIKNPNTLNQRTLI 355
           T  P +    ++ ++C+ + L+L ++    SE++       +++   + + +  N   ++
Sbjct: 78  TLDPKMAAEGNLFEICKFYSLYLEHLRKDQSELL-------TIVLERLASQSDFNSTVIL 130

Query: 356 KIQAIIDYMHEKINIGNWKDVKL 424
            +    D ++ + N+G+W D  L
Sbjct: 131 DMFTFFDKLYSEGNVGDWWDFLL 153


>Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical
           protein T11A5.3 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 298 ITFESLYKKSKHLESANFNQNTSNNR 375
           I+F  LYK++KH+ +   + +T +NR
Sbjct: 203 ISFHYLYKQNKHIRNTGVHHSTLSNR 228


>Z81523-3|CAB04242.1|  163|Caenorhabditis elegans Hypothetical
           protein F32H2.2 protein.
          Length = 163

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 452 SYLKLLIYWKDP 487
           +YLK L+YWKDP
Sbjct: 43  NYLKYLLYWKDP 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,629,653
Number of Sequences: 27780
Number of extensions: 199634
Number of successful extensions: 550
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)