Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9o05
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical p...    34   0.085
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    34   0.085
U53154-10|AAC25849.1|  142|Caenorhabditis elegans Hypothetical p...    33   0.15 
U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical p...    29   2.4  
AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy pro...    29   2.4  
AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical ...    29   2.4  
AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical ...    29   2.4  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    28   5.6  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   5.6  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   5.6  
Z81568-2|CAB04590.1|  276|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical ...    28   7.4  
AF067216-1|AAC17524.1|  301|Caenorhabditis elegans Hypothetical ...    28   7.4  
AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and cap...    28   7.4  
U41746-7|AAK71873.1|  803|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>U28739-11|AAR25657.1|  487|Caenorhabditis elegans Hypothetical
           protein C17G10.6b protein.
          Length = 487

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 26/101 (25%), Positives = 38/101 (37%)
 Frame = +3

Query: 57  KKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEEN 236
           KK       KKG KKN+D D+D DE      +  +L              G+ +D  EE+
Sbjct: 291 KKGKKGKKGKKGKKKNKDDDEDEDEDDD--EDNGDLERVDGIVKIPKAIDGN-TDDHEED 347

Query: 237 IKKVPVSDEEDVXXXXXXXXXXXXXXXXXXADRSDDEEDDN 359
            +     +E+D                    +  D+EEDDN
Sbjct: 348 YEDEDEEEEDDNEDDENSRKKKKGRKNGRKKNNEDEEEDDN 388


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 26/101 (25%), Positives = 38/101 (37%)
 Frame = +3

Query: 57  KKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEEN 236
           KK       KKG KKN+D D+D DE      +  +L              G+ +D  EE+
Sbjct: 342 KKGKKGKKGKKGKKKNKDDDEDEDEDDD--EDNGDLERVDGIVKIPKAIDGN-TDDHEED 398

Query: 237 IKKVPVSDEEDVXXXXXXXXXXXXXXXXXXADRSDDEEDDN 359
            +     +E+D                    +  D+EEDDN
Sbjct: 399 YEDEDEEEEDDNEDDENSRKKKKGRKNGRKKNNEDEEEDDN 439


>U53154-10|AAC25849.1|  142|Caenorhabditis elegans Hypothetical
           protein C33G8.3 protein.
          Length = 142

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 57  KKENHNMSKKKGNKKNQDLDDDFD-EKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEE 233
           K++    +KKKGNKK++D +++ D +K     +K + +              D SD  EE
Sbjct: 72  KEKREKKNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEEDKKKDKKKKNDSSDESEE 131

Query: 234 NIKK 245
             KK
Sbjct: 132 ENKK 135


>U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical
           protein C33G8.2 protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
 Frame = +3

Query: 57  KKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEEN 236
           KKE     KKK +KK +  +DD +E+     +K E                   D+DEE 
Sbjct: 137 KKEEEEKDKKKKDKKKE--EDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEE 194

Query: 237 IKK-VPVSDEEDVXXXXXXXXXXXXXXXXXXADRSDDEEDDNK 362
            +K     D++                     D+ DDE +D+K
Sbjct: 195 KEKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDK 237



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/70 (27%), Positives = 27/70 (38%)
 Frame = +3

Query: 60  KENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEENI 239
           +E     KKK  KK+ D DDD  EK     +  +                D  D  +++ 
Sbjct: 310 EEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDKKKKKDDVDDDMKKDK 369

Query: 240 KKVPVSDEED 269
           KK    D+ED
Sbjct: 370 KKKEDDDKED 379



 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/100 (23%), Positives = 35/100 (35%)
 Frame = +3

Query: 63  ENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEENIK 242
           E     KKK  KKN   DDD ++K     +K +                   D D+E+ +
Sbjct: 255 EEEKDKKKKDKKKN---DDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEE 311

Query: 243 KVPVSDEEDVXXXXXXXXXXXXXXXXXXADRSDDEEDDNK 362
           K     ++D                    D  DD+ED++K
Sbjct: 312 KEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDK 351



 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 57  KKENHNMSKKKGNKKNQDLDDDFDE 131
           K ++    KKK  KK +D DDD DE
Sbjct: 267 KNDDDEEDKKKDKKKKKDDDDDEDE 291


>AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy
           protein 9 protein.
          Length = 947

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 51  FVKKENHNMSKKKGNKKNQDLDDDFDEK 134
           F +K+ H M   +  +  Q +DDDFD++
Sbjct: 20  FFQKKTHQMFNSQSKRAYQQIDDDFDDE 47


>AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical
           protein T22H9.2b protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 51  FVKKENHNMSKKKGNKKNQDLDDDFDEK 134
           F +K+ H M   +  +  Q +DDDFD++
Sbjct: 20  FFQKKTHQMFNSQSKRAYQQIDDDFDDE 47


>AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical
           protein T22H9.2a protein.
          Length = 880

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 51  FVKKENHNMSKKKGNKKNQDLDDDFDEK 134
           F +K+ H M   +  +  Q +DDDFD++
Sbjct: 20  FFQKKTHQMFNSQSKRAYQQIDDDFDDE 47


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 45   NNFVKKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEK 155
            +NF ++ N  + K+K +K  Q+ DD+F ++ +   +K
Sbjct: 7583 DNFKQEANAKLQKEKDDKLKQEKDDNFKQEANAKLQK 7619


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 45   NNFVKKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEK 155
            +NF ++ N  + K+K +K  Q+ DD+F ++ +   +K
Sbjct: 7603 DNFKQEANAKLQKEKDDKLKQEKDDNFKQEANAKLQK 7639


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 45   NNFVKKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEK 155
            +NF ++ N  + K+K +K  Q+ DD+F ++ +   +K
Sbjct: 7603 DNFKQEANAKLQKEKDDKLKQEKDDNFKQEANAKLQK 7639


>Z81568-2|CAB04590.1|  276|Caenorhabditis elegans Hypothetical
           protein K08E3.2 protein.
          Length = 276

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +3

Query: 45  NNFVKKENHNMSK--KKGNKKNQDLDDDFDEK 134
           NN  K EN N +K  +K  KK++  DD+ DE+
Sbjct: 116 NNEKKDENKNKNKDERKDEKKDEKKDDEKDER 147


>Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 51  FVKKENHNMSKKKGNKKNQDLDDDFDEK 134
           F + E  +   KK + +N+D D+DF+EK
Sbjct: 351 FRETEERDNPSKKSDSENEDNDNDFNEK 378


>AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 51  FVKKENHNMSKKKGNKKNQDLDDDFDEK 134
           F + E  +   KK + +N+D D+DF+EK
Sbjct: 351 FRETEERDNPSKKSDSENEDNDNDFNEK 378


>AF067216-1|AAC17524.1|  301|Caenorhabditis elegans Hypothetical
           protein C35E7.9 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 21/104 (20%), Positives = 38/104 (36%)
 Frame = +3

Query: 54  VKKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTSXXXXXXXXXXXTGDCSDSDEE 233
           +K    N+  KK  KK +   ++  +K     EK++ +              D  D  ++
Sbjct: 45  MKPPVENVKSKKSEKKEEPKKEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKD 104

Query: 234 NIKKVPVSDEEDVXXXXXXXXXXXXXXXXXXADRSDDEEDDNKS 365
             K+    D++D                    D+ +DE+DD KS
Sbjct: 105 EKKEDKKDDKKD-DKKEEKKEEKKEDEKEKGDDKKEDEKDDKKS 147


>AC024772-2|AAF60537.2|  756|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 4 protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -3

Query: 204 FYSSSCLFLYF*RLVLSFHSRLKAFHRNRHLNLDFFCFLSFST 76
           F   S   +YF  +   F  R   F R +H+  D  CF  F T
Sbjct: 384 FAQLSMFCIYFICVTSCFLLRPSPFERQQHIANDLICFYDFKT 426


>U41746-7|AAK71873.1|  803|Caenorhabditis elegans Hypothetical
           protein T18H9.7a protein.
          Length = 803

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = +3

Query: 18  LKFNLILLYNNFVKKENHNMSKKKGNKKNQDLDDDFDEKPSVVNEKTELTS 170
           LK+ +  L+N F  ++      K+   ++ D+D  +D  P + N+   + S
Sbjct: 235 LKYQMNKLFNMFRPEDGRRPVVKEMPWEDDDIDSPYDSGPEMFNDDASIRS 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,525,093
Number of Sequences: 27780
Number of extensions: 186342
Number of successful extensions: 914
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)