Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9o01
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical pr...    31   0.65 
AF036703-3|AAB88556.2|  424|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z99102-2|CAB11775.1|  499|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z74043-12|CAA98548.1|  503|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z74040-7|CAA98515.1|  503|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AL117203-2|CAB55104.1|  321|Caenorhabditis elegans Hypothetical ...    28   6.0  
AL117204-13|CAB55128.1|  286|Caenorhabditis elegans Hypothetical...    28   8.0  
AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical ...    28   8.0  

>U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical
           protein C56E6.5 protein.
          Length = 595

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
 Frame = -1

Query: 379 SSVFFLEISAFLFCITTN*IYFMN---SALRAIKAASLSWCRWNQFRWVSLRVYSFFCKR 209
           SS+FF ++  FL+ +    + F N   ++L + +  +L +C+       S+    + C +
Sbjct: 368 SSLFFWKLLTFLYLLLQTIVIFPNYSKTSLLSFRECNL-YCQTTSLTIFSIFFLVYSCIQ 426

Query: 208 IDLFVDSLMFHFHIDSCKPVSFLLFL 131
             LFV  +++ F  ++   +S  LFL
Sbjct: 427 SSLFVGIVLWSFKSEAMFQISLNLFL 452


>AF036703-3|AAB88556.2|  424|Caenorhabditis elegans Hypothetical
           protein T11F8.2 protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -3

Query: 650 WYNLYSLHTLNFLIFMMTIVQINPMLSNLTIYFGYIIAQI 531
           W  +   HT++FL FM  +   N   S +T YF + +  +
Sbjct: 263 WSYMKGTHTISFLSFMALLCFYNFQRSPMTTYFAFFVCNV 302


>Z99102-2|CAB11775.1|  499|Caenorhabditis elegans Hypothetical
           protein B0331.1 protein.
          Length = 499

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 410 SW*CSWNVNKNINLPQDVYKSVLNLF 487
           SW C WN+  N  + ++VYK ++++F
Sbjct: 319 SWLC-WNIAHNPEVQENVYKEIISIF 343


>Z74043-12|CAA98548.1|  503|Caenorhabditis elegans Hypothetical
           protein T19B10.1 protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 410 SW*CSWNVNKNINLPQDVYKSVLNLF 487
           SW C WN+  N N+ + VYK ++ +F
Sbjct: 320 SWAC-WNLAHNPNVQEKVYKEMIEVF 344


>Z74040-7|CAA98515.1|  503|Caenorhabditis elegans Hypothetical
           protein T19B10.1 protein.
          Length = 503

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 410 SW*CSWNVNKNINLPQDVYKSVLNLF 487
           SW C WN+  N N+ + VYK ++ +F
Sbjct: 320 SWAC-WNLAHNPNVQEKVYKEMIEVF 344


>Z22181-1|CAA80179.1|  710|Caenorhabditis elegans Hypothetical
           protein ZK632.2 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 115 LYTDQKGRGERRQVCKNQYGSETSSYRRTNQSVYKKNC 228
           LY D+ G+ E+++  + Q+  E   ++RT    Y+  C
Sbjct: 380 LYLDRTGQLEKQREKRKQWAEEGFGHKRTETDTYESLC 417


>AL117203-2|CAB55104.1|  321|Caenorhabditis elegans Hypothetical
           protein Y48C3A.3 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 594 RPNKPYAIQFNHLFRIYYCPNLNPKKDTVLNIC 496
           +P K  A  F+HL +IYY P  +  +D +   C
Sbjct: 244 KPTKVDACIFSHLCQIYYAPYTSEHRDLIDGEC 276


>AL117204-13|CAB55128.1|  286|Caenorhabditis elegans Hypothetical
           protein Y116A8C.22 protein.
          Length = 286

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = -2

Query: 537 PNLNPKKDT----VLNICMIVNKLSTDL*TSCGKLIFL 436
           P +N KKDT    V  IC + +K  T L T C K + L
Sbjct: 228 PEINQKKDTKQVHVCPICTLASKNGTCLCTKCQKWVHL 265


>AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical
           protein Y62H9A.1 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = -1

Query: 562 PFISDILLPKFKSKERYCAKYLYDCKQIKYGFVDILWQVNILIDVPRALPRLFAQTMQS 386
           PF   +L P   +    C  YL   K ++YGF  +   V +   VPR  P+   QT  S
Sbjct: 289 PFAMVVLAPTQLTCPVICILYLILIKPLRYGFFKL---VGLHKYVPRNQPKAVTQTQLS 344


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,382,798
Number of Sequences: 27780
Number of extensions: 348254
Number of successful extensions: 921
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)