Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9n14
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81142-6|CAB03508.1| 344|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical p... 27 3.0
Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical p... 27 3.0
Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical p... 27 3.0
Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical p... 27 3.0
AF068717-3|AAC17762.2| 361|Caenorhabditis elegans Serpentine re... 27 4.0
AF067950-1|AAG24154.1| 361|Caenorhabditis elegans Serpentine re... 27 4.0
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 27 5.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 27 5.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 27 5.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 27 5.3
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 26 9.3
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 26 9.3
U42842-2|AAA83592.3| 341|Caenorhabditis elegans Hypothetical pr... 26 9.3
AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical ... 26 9.3
>Z81142-6|CAB03508.1| 344|Caenorhabditis elegans Hypothetical
protein ZK1037.9 protein.
Length = 344
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 216 EDCLSHILHCLSCEIIRLXGIYEAISCYKSVHFSXPSILINLFIFTVILK 67
+D ++ + CEI Y + H S +LINLF FT++ +
Sbjct: 10 DDKTRNLTEPVLCEIANSLSTVTKALTYITPHISFLCVLINLFHFTILTR 59
>Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical
protein R07H5.2b protein.
Length = 476
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 351 PVHQQGFSLIHVTISNYIGKAASSMKSKIDS 259
PV Q GF + + + N +G SS KSK D+
Sbjct: 424 PVVQDGFGIGYNVVPNKLGAVISSNKSKRDA 454
>Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 351 PVHQQGFSLIHVTISNYIGKAASSMKSKIDS 259
PV Q GF + + + N +G SS KSK D+
Sbjct: 594 PVVQDGFGIGYNVVPNKLGAVISSNKSKRDA 624
>Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical
protein R07H5.2b protein.
Length = 476
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 351 PVHQQGFSLIHVTISNYIGKAASSMKSKIDS 259
PV Q GF + + + N +G SS KSK D+
Sbjct: 424 PVVQDGFGIGYNVVPNKLGAVISSNKSKRDA 454
>Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 351 PVHQQGFSLIHVTISNYIGKAASSMKSKIDS 259
PV Q GF + + + N +G SS KSK D+
Sbjct: 594 PVVQDGFGIGYNVVPNKLGAVISSNKSKRDA 624
>AF068717-3|AAC17762.2| 361|Caenorhabditis elegans Serpentine
receptor, class w protein142 protein.
Length = 361
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 135 YKSVHFSXPSILINLFIFTVILK 67
Y HFS SI INLF F ++++
Sbjct: 38 YFEPHFSAASIFINLFHFLILIR 60
>AF067950-1|AAG24154.1| 361|Caenorhabditis elegans Serpentine
receptor, class w protein141 protein.
Length = 361
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 135 YKSVHFSXPSILINLFIFTVILK 67
Y HFS SI INLF F ++++
Sbjct: 38 YFEPHFSAASIFINLFHFLILIR 60
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = -1
Query: 180 CEIIRLXGIYEAISCYKSV-----HFSXPS 106
C ++ + GIY A+ C +SV HF+ PS
Sbjct: 5 CRVLLIFGIYVAVCCAQSVEDDVFHFTNPS 34
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = -1
Query: 180 CEIIRLXGIYEAISCYKSV-----HFSXPS 106
C ++ + GIY A+ C +SV HF+ PS
Sbjct: 5 CRVLLIFGIYVAVCCAQSVEDDVFHFTNPS 34
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = -1
Query: 180 CEIIRLXGIYEAISCYKSV-----HFSXPS 106
C ++ + GIY A+ C +SV HF+ PS
Sbjct: 5 CRVLLIFGIYVAVCCAQSVEDDVFHFTNPS 34
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Frame = -1
Query: 180 CEIIRLXGIYEAISCYKSV-----HFSXPS 106
C ++ + GIY A+ C +SV HF+ PS
Sbjct: 5 CRVLLIFGIYVAVCCAQSVEDDVFHFTNPS 34
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 121 MNRFITRNCFVNSXQADDFTRQTVQDVRQAVLSSASLR--PRIQEALERINFRF 276
+N+FI + + D RQ + ++ S LR P + +AL+ +NF+F
Sbjct: 178 LNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQF 231
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 121 MNRFITRNCFVNSXQADDFTRQTVQDVRQAVLSSASLR--PRIQEALERINFRF 276
+N+FI + + D RQ + ++ S LR P + +AL+ +NF+F
Sbjct: 203 LNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQF 256
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 121 MNRFITRNCFVNSXQADDFTRQTVQDVRQAVLSSASLR--PRIQEALERINFRF 276
+N+FI + + D RQ + ++ S LR P + +AL+ +NF+F
Sbjct: 587 LNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQF 640
>U42842-2|AAA83592.3| 341|Caenorhabditis elegans Hypothetical
protein EGAP2.1 protein.
Length = 341
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 194 CTVCLVKSSAWXEFTK-QFRVINLFI 120
C+ C +K +W E+TK F+ I F+
Sbjct: 124 CSSCSIKFGSWFEYTKLSFKTIFSFL 149
>AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical
protein C53A3.1 protein.
Length = 304
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 201 HILHCLSCEIIRLXGIYEAISCYKSVHFS 115
H + ++CE+IRL + KS+H+S
Sbjct: 273 HEVQNMNCELIRLRRAVHHLKLNKSIHYS 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,592,495
Number of Sequences: 27780
Number of extensions: 128815
Number of successful extensions: 272
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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