Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9n12
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC306.08c |||malate dehydrogenase|Schizosaccharomyces pombe|ch... 81 1e-16
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 47 3e-06
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 30 0.25
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 1.7
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 2.3
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 27 2.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 5.3
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 25 7.0
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.3
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 25 9.3
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 9.3
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 25 9.3
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 9.3
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 9.3
>SPCC306.08c |||malate dehydrogenase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 341
Score = 81.4 bits (192), Expect = 1e-16
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +2
Query: 212 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFI 391
R +V+V+GA IG +S+ LK N KVS+L L+D G ++ ++ +V +
Sbjct: 27 RAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGA-PGVAADIGHINTTSNVVGYA 85
Query: 392 -GDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIS 568
D LE+A++ +++V++ + +PRKPG TR+ + NA +++ L A EA +
Sbjct: 86 PDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEAKYLVV 145
Query: 569 TNPINYLIPFASTVMYKYGCYNP 637
TNP+N +P + + G + P
Sbjct: 146 TNPVNSTVPIFKKALERVGVHQP 168
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/128 (20%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = +2
Query: 212 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYD-DDDRIKGTELELSNL-PGGPSVSA 385
+++++ ++GA + +GS + L + +++ + D + + +G ++L++ P
Sbjct: 19 KSIKIVIVGAGN-VGSTTAFTLLLSGLAAEIVIIDLNKKKAEGEAMDLNHAAPLSHETRV 77
Query: 386 FIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAI 565
++GD + + VV+ + +KPG TR +L AN + + + + + ++A + +
Sbjct: 78 YLGDY---KDCKDATAVVITAGKNQKPGETRMDLLKANISIFKEILREVTKYTKDAILLV 134
Query: 566 STNPINYL 589
+TNP++ L
Sbjct: 135 ATNPVDVL 142
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 30.3 bits (65), Expect = 0.25
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 188 SLAALQI-NNKIFFGPFFFQYFCKICFLTSHFTIFVTFLL 72
SL L I NNK+FF P +Y + +L + FVTF L
Sbjct: 503 SLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPL 542
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 145 GPKNILLFICNAAKEKHTDLTKKKCTSIC 231
G K + F CN KEK D T SIC
Sbjct: 23 GDKTVTCFYCNKKKEKIRDGTSTWTCSIC 51
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 476 REQMLGANAPLIQ-RLCKAIAAQNQEAFVAISTNPINYLIPFASTVMY 616
RE ++G N ++ +L + + + E +++NP+N I A TV+Y
Sbjct: 860 RESIIGLNPRTLEAKLLLYLKSLDVEIDALVASNPLNIRIMAAETVVY 907
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNL 361
+KK +++ KR+ +++ + A S GS+ L +S +S L +D + G + +
Sbjct: 216 IKKPSMVDHKRDSEINAVTAVSADGSFSPLTETLSSTISTL----SNDSLDGLSSQKNEF 271
Query: 362 PGGPSVSAFIGDTNLEQAIHS 424
G S S +I + ++ +S
Sbjct: 272 TGFNSNSEWIPNDTVDYICNS 292
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 111 KTYFTKVLKKKWPKKYFVVYLQRS*RKTH*SYKKEMYKYL 230
K +F+K+L++ K VY + K+H Y KE+ +++
Sbjct: 1830 KGWFSKLLRRDESKDQPTVYKAKLGEKSHLHYDKELKRWV 1869
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 278 KRNSKVSKLHLYDDDDRIKGTELELSNLPGG 370
+RN++ S HL+ D ++ LE+ +LP G
Sbjct: 129 ERNARYSTSHLFLPSDFLQVNNLEIIHLPPG 159
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 329 IKGTELELSNLPGGPSVSAF 388
IK L+L +LP P+VS+F
Sbjct: 6 IKAASLDLESLPSQPTVSSF 25
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 185 LAALQINNKIFFGPFFFQYFCKICFLTSH 99
L AL I + F FFF Y C+ C H
Sbjct: 25 LFALVIILSVIFINFFFFYLCRCCVYFYH 53
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 234 ITDTCTFLFCKISVFFFSCVANKQQNIFWAIF 139
I+D + S+F +N + FWAIF
Sbjct: 380 ISDVALLIIALYSIFIILLSSNSHYSQFWAIF 411
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 25.0 bits (52), Expect = 9.3
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 167 NNKIFFGPFFFQYFCKICFLTSHF-TIFVTFLLRGHDICCRY 45
N+K FF F+ IC L S F I TF G +I Y
Sbjct: 138 NHKFFFLECFYLNLYSICVLYSTFVAITKTFTAEGANISAIY 179
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 153 FWAIFFSILL*NMFFNITFYYFCDFFIAWS*YL 55
FW F++++ +N + F DFF+ + +L
Sbjct: 1445 FWVTMFALVICPFIYNPHQFSFVDFFVDYREFL 1477
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 170 INNKIFFGPFFFQYFCKICFLTSHFTIFVTFLLRG 66
INN+ F +F + C I F+ + +VT+ L G
Sbjct: 1373 INNEAFNWRVYFGW-CSIAFIQAFLVFYVTYSLFG 1406
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,694,747
Number of Sequences: 5004
Number of extensions: 56919
Number of successful extensions: 133
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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