Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9n08
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z34802-6|CAB54282.1|  594|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z34802-5|CAA84337.1|  610|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p...    28   8.0  
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    28   8.0  
AF022974-5|AAC48036.3|  347|Caenorhabditis elegans Seven tm rece...    28   8.0  

>Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical
           protein K07A12.2 protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = +3

Query: 387 PRDCICSVSQGYRQAKCSFLEIGTQKFGDDILDLV-VENADPRYPINLDDFMFKKLGLHQ 563
           P  C C +S+      C+  ++ T      I   V     D  + +N  D   + L  + 
Sbjct: 27  PEKCDCKISKSMIILSCNGEDVKT------IAQTVGTSQIDELHILNGTDVKIESLPFNG 80

Query: 564 VATVKIVNSTIGYIAPNAFHGVH-DLYAVNLSNNNLK 671
           + T+ I+NST+   +P A+  V   +  + ++ N LK
Sbjct: 81  LRTIAILNSTLQSFSPTAWRHVEATIEHITINGNELK 117


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   VSERPDERTTDWRRHYSQSIRTNVTVCQLFICFSFIDRVRTSLLRSARFQKSSVTVIEWL 182
           V E+  E T D+ + +  ++  +    +L +    I+ +R   L     ++  V  +EWL
Sbjct: 167 VEEKITEMTDDYIQKHFMAVSKDEDFKRLSL-EDAIELLRNDHLYVDSEEQVYVAAMEWL 225

Query: 183 N*SQRVRYDMGARSREXXXXXXXXXXVFGESI--NKTVKKDKDADNLLDQYEDYEPAEYQ 356
           N    +R++  A+                  +  N  +KKD    +L+D+ +DY     +
Sbjct: 226 N-CDVIRHEQAAKILPCVRLPLLSPTYLSSIVASNPIIKKDIPCRDLIDEAKDYHLLPDR 284

Query: 357 EVLYNEDRPCPRDC 398
             L    +  PR C
Sbjct: 285 RSLIKSFKCTPRLC 298


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   VSERPDERTTDWRRHYSQSIRTNVTVCQLFICFSFIDRVRTSLLRSARFQKSSVTVIEWL 182
           V E+  E T D+ + +  ++  +    +L +    I+ +R   L     ++  V  +EWL
Sbjct: 165 VEEKITEMTDDYIQKHFMAVSKDEDFKRLSL-EDAIELLRNDHLYVDSEEQVYVAAMEWL 223

Query: 183 N*SQRVRYDMGARSREXXXXXXXXXXVFGESI--NKTVKKDKDADNLLDQYEDYEPAEYQ 356
           N    +R++  A+                  +  N  +KKD    +L+D+ +DY     +
Sbjct: 224 N-CDVIRHEQAAKILPCVRLPLLSPTYLSSIVASNPIIKKDIPCRDLIDEAKDYHLLPDR 282

Query: 357 EVLYNEDRPCPRDC 398
             L    +  PR C
Sbjct: 283 RSLIKSFKCTPRLC 296


>Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical
           protein T05A1.3 protein.
          Length = 747

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 573 VKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLKEPSS 683
           V + N+ + Y+  +AF  + +L  ++L NN+LKE  S
Sbjct: 266 VDLSNNKLTYLHDHAFEHLTNLILLDLKNNSLKEVKS 302


>Z34802-6|CAB54282.1|  594|Caenorhabditis elegans Hypothetical
           protein M88.6b protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 552 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLK 671
           G+  +  + + N  +  I   AF G++ L  + LSNNNL+
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLE 236


>Z34802-5|CAA84337.1|  610|Caenorhabditis elegans Hypothetical
           protein M88.6a protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 552 GLHQVATVKIVNSTIGYIAPNAFHGVHDLYAVNLSNNNLK 671
           G+  +  + + N  +  I   AF G++ L  + LSNNNL+
Sbjct: 197 GMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLE 236


>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
            protein F10F2.1 protein.
          Length = 2507

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 465  FGDDILDLVVENADPRYPI-NLDDFMFKKLGLHQVATVKIV-NSTIGYIAPNAFHGVHDL 638
            FG     L+ E   PR+ I ++   MF++        +K + NS + Y+A N FH +   
Sbjct: 2091 FGQTPSQLLTEAHPPRHSIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQP 2150

Query: 639  YAVNLSNN 662
              V ++ N
Sbjct: 2151 TVVGVAQN 2158


>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
            F10F2.1 protein.
          Length = 2507

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 465  FGDDILDLVVENADPRYPI-NLDDFMFKKLGLHQVATVKIV-NSTIGYIAPNAFHGVHDL 638
            FG     L+ E   PR+ I ++   MF++        +K + NS + Y+A N FH +   
Sbjct: 2091 FGQTPSQLLTEAHPPRHSIMSMAPTMFRRHDEDLCMMMKYISNSPVVYLAANTFHQLPQP 2150

Query: 639  YAVNLSNN 662
              V ++ N
Sbjct: 2151 TVVGVAQN 2158


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 560 PGCYCKNREQHDWLYRPQCFPWCP 631
           P CYC  RE+H  L + +C  W P
Sbjct: 153 PDCYCGKREKHCDLSKEKCH-WTP 175


>AF022974-5|AAC48036.3|  347|Caenorhabditis elegans Seven tm
           receptor protein 208 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -1

Query: 500 VFDHEIKDIIAELLCTDFEEAALGLSVSLRYRAYAVSGTGPVLVVQNLLVF 348
           +  +++  ++  L C  F    +  SV   YR +AVSG   +   + + +F
Sbjct: 83  LLSYDVLLLLVSLCCAFFGSLMVMFSVQFIYRFWAVSGNNSIKTFEGVRIF 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,213,368
Number of Sequences: 27780
Number of extensions: 343751
Number of successful extensions: 1059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)