Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9n05
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    30   0.060
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   5.2  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   9.1  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   9.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 30.3 bits (65), Expect = 0.060
 Identities = 16/75 (21%), Positives = 35/75 (46%)
 Frame = +1

Query: 433 TDFIKRERKMMTNLVEKPETRFKVDIVKEERESVVDDLSRFLLNEKHFVEWQKIKAKQVK 612
           T   + +R     L+EK + +   ++    RE +   L +     +H++E+QK+      
Sbjct: 171 TSMYEAKRDSALKLIEKKDAKLN-ELYAVIREEIEPKLEKLRKEREHYIEFQKVCRDIEY 229

Query: 613 ETYEYMKHKYSKVLK 657
            T  Y+ ++Y ++ K
Sbjct: 230 LTRLYVSYRYLQLCK 244


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 493 RFKVDIVKEERESVVDDLSRFLLN-EKHFVEWQKIKAKQVKETYEYMKHKYSKVLKKC 663
           R +++ +K       D   R LLN  K    W+ I  K+VK  Y  +      V KKC
Sbjct: 257 RTRIEDLKMVLGQTQDQRQRVLLNVAKEVPNWEII-VKKVKAIYHTLNMFNVDVSKKC 313


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 90  CVIIYKRFVCLFFLYFVKSICQQ 22
           C  +YK F C +  Y   S C Q
Sbjct: 136 CTQVYKAFQCYYQYYGALSECPQ 158


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 90  CVIIYKRFVCLFFLYFVKSICQQ 22
           C  +YK F C +  Y   S C Q
Sbjct: 136 CTQVYKAFQCYYQYYGALSECPQ 158


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 127 TERLERPIKWEAHEF 171
           T  + RP  WE HEF
Sbjct: 200 TPSIARPETWEVHEF 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,816
Number of Sequences: 2352
Number of extensions: 14918
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)