Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9n05
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    35   0.091
AE014134-3185|AAF53863.1|  470|Drosophila melanogaster CG13966-P...    31   1.1  

>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 35.1 bits (77), Expect = 0.091
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +1

Query: 475 VEKPETRFKVDIVKEERESVVDDLSRFLLNEKHFVEWQKIKAKQVKETYEYMKHKYSKVL 654
           V   E +FK+D +K +  SV D LSR  + E H  E  +  A++      ++  K     
Sbjct: 597 VRLSEYQFKIDYIKGKENSVADALSRIKIEENHHSEATQHSAEEDNSNLIHLTEKPINYF 656

Query: 655 KK 660
           KK
Sbjct: 657 KK 658


>AE014134-3185|AAF53863.1|  470|Drosophila melanogaster CG13966-PA
           protein.
          Length = 470

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 529 SVVDDL-SRFLLNEKHFVEWQKIKAKQVKETYEYMKHK 639
           +++++L S+     +H ++W+K  A QV++ Y Y K K
Sbjct: 111 AIIEELRSKVRFQTEHIMKWRKAYAMQVQQHYRYQKEK 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,899,979
Number of Sequences: 53049
Number of extensions: 602795
Number of successful extensions: 1546
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)