Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m20
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 306 REGHFPLVIWQTGSGTQSNMNTNEV 380
           R G  PL++W  G G  S   T +V
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTATLDV 178


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 306 REGHFPLVIWQTGSGTQSNMNTNEV 380
           R G  PL++W  G G  S   T +V
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTATLDV 178


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 33  PEGKPVKTRKEKDTFGELDVPDDKLYGAQTV 125
           PE K ++T  + D FGE  +  D L  A  +
Sbjct: 275 PEEKYIRTLSKGDFFGEKALQGDDLRTANII 305


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 614 GPSNFDDPLKVLALGLQRVPEGHE 543
           GP N+  P+  +A G+Q+  +  E
Sbjct: 60  GPKNYTTPVNFVAGGIQQAGKPKE 83


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 47  RLAFWVETCR 18
           RLAFW  TCR
Sbjct: 367 RLAFWRLTCR 376


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,387
Number of Sequences: 438
Number of extensions: 4288
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)