Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9m19
         (250 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E9U3 Cluster: Chromosome undetermined scaffold_85, wh...    31   3.7  
UniRef50_Q04322 Cluster: Uncharacterized protein YMR192W; n=2; S...    31   3.7  
UniRef50_A6QAU9 Cluster: Hydrogenase maturation protein HypF; n=...    31   4.9  
UniRef50_Q54WC1 Cluster: Leucine aminopeptidase; n=2; Dictyostel...    31   4.9  
UniRef50_A3QMB0 Cluster: Putative uncharacterized protein sre-14...    31   4.9  
UniRef50_Q22E47 Cluster: Ubiquitin carboxyl-terminal hydrolase f...    30   8.5  

>UniRef50_A0E9U3 Cluster: Chromosome undetermined scaffold_85, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_85,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 290

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +3

Query: 30  LKVFSKTRCVMNKLNIKLIRKFSDSCQEASGEINQKLDSSKKGLVLGVYQCGKKLELTPV 209
           +K  S T C+ NK     I  +   CQ+ S +  QKL +S   L     Q   +  L  +
Sbjct: 153 IKNESMTFCIYNKKEQHHIYLYLSDCQDRSFDTMQKLQASATQLYSPQKQTKDQTSLNQI 212

Query: 210 GQELDQKS 233
            QE+ Q++
Sbjct: 213 NQEIFQET 220


>UniRef50_Q04322 Cluster: Uncharacterized protein YMR192W; n=2;
           Saccharomyces cerevisiae|Rep: Uncharacterized protein
           YMR192W - Saccharomyces cerevisiae (Baker's yeast)
          Length = 720

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 57  VMNKLNIKLIRKFSDSCQEASGEINQKLDSSKKGLVLGVY 176
           V N+LNI+ +   ++  +    ++ +KLDS KK  VLGVY
Sbjct: 609 VKNRLNIESVLNENNGYKLQILDLKKKLDSEKKKQVLGVY 648


>UniRef50_A6QAU9 Cluster: Hydrogenase maturation protein HypF; n=1;
           Sulfurovum sp. NBC37-1|Rep: Hydrogenase maturation
           protein HypF - Sulfurovum sp. (strain NBC37-1)
          Length = 740

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 90  KFSDSCQEASGEINQKLDSSKKGLVLGVYQCGKKLEL 200
           KF + C+  + E N  LD       +G YQCG  L L
Sbjct: 152 KFFEMCEMCTKEYNDPLDRRYHAQPIGCYQCGPGLSL 188


>UniRef50_Q54WC1 Cluster: Leucine aminopeptidase; n=2; Dictyostelium
           discoideum|Rep: Leucine aminopeptidase - Dictyostelium
           discoideum AX4
          Length = 520

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +3

Query: 129 NQKLDSS--KKGLVLGVYQCGKKLELTPVGQELDQKSGG 239
           N+  DS+   KG ++G+Y+     E TP+GQ+L++K+ G
Sbjct: 26  NKMTDSTVDNKGYIVGIYE---NEEFTPLGQQLNEKTNG 61


>UniRef50_A3QMB0 Cluster: Putative uncharacterized protein sre-14;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein sre-14 - Caenorhabditis elegans
          Length = 347

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 27  FLKVFSKTRCVMNKLNIKLIRKFSDSCQEA 116
           FL V S T C+ N LN K+ +K+  +CQ++
Sbjct: 168 FLLVLSATSCLGNMLNYKINQKYYRACQQS 197


>UniRef50_Q22E47 Cluster: Ubiquitin carboxyl-terminal hydrolase family
            protein; n=1; Tetrahymena thermophila SB210|Rep:
            Ubiquitin carboxyl-terminal hydrolase family protein -
            Tetrahymena thermophila SB210
          Length = 2585

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +3

Query: 54   CVMNKL--NIKLIRKFSDSCQEASGEINQKLDSSKKGLVLGVYQ 179
            C MN L   + +IR+FSDS Q+     ++K  +SK+ ++  V Q
Sbjct: 1605 CYMNSLIQQLFMIREFSDSLQKVDASTSEKEYNSKENVLYQVQQ 1648


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,512,517
Number of Sequences: 1657284
Number of extensions: 2475091
Number of successful extensions: 6713
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6710
length of database: 575,637,011
effective HSP length: 61
effective length of database: 474,542,687
effective search space used: 9965396427
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)